RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SPRED2Q7Z698 418 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 THAP5Q7Z6K1 395 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 HRASLS5Q96KN8 279 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 TIGD1Q96MW7 591 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 COL3A1P02461 1466 aaPredicted RBP9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 PIK3C2AO00443 1686 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 USP6P35125 1406 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 SYCE3A1L190 88 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 FYB1O15117 783 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 WNT11O96014 354 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 ARHGAP27Q6ZUM4 889 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 MORC1Q86VD1 984 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 CHD1LQ86WJ1 897 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 GPT2Q8TD30 523 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 GCC1Q96CN9 775 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 HSPA12BQ96MM6 686 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 SLC6A18Q96N87 628 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 PAK6Q9NQU5 681 aaPredicted RBP9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 SUCOQ9UBS9 1254 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 PHRF1Q9P1Y6 1649 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 PNPLA6Q8IY17 1366 aa9.11□□□□□ -0.95
UBE2D3-204ENST00000349311 SCO2A0A1W2PP80 73 aa9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 A0A1W2PQH9 124 aa9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 IPO8O15397 1037 aaKnown RBP9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 CTIFO43310 598 aaKnown RBP9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 BNIP3Q12983 259 aa9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 AOC3Q16853 763 aa9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 ZNF830Q96NB3 372 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 SLC5A6Q9Y289 635 aa9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 TRPM3Q9HCF6 1732 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-204ENST00000349311 CDK12Q9NYV4 1490 aaPredicted RBP9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 TTC21AQ8NDW8 1320 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 OVOS2A0A0J9YW53 1432 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 OVOS2Q6IE36 1432 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 GOLGA6L6A8MZA4 724 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 CLEC3AO75596 197 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 CD8BP10966 210 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 KCNJ4P48050 445 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 PMS1P54277 932 aaKnown RBP9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 RNF4P78317 190 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 GAB4Q2WGN9 574 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 TTC6Q86TZ1 520 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 ASB11Q8WXH4 323 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 DHRS1Q96LJ7 313 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 ZNF214Q9UL59 606 aaPredicted RBP9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 KCNH3Q9ULD8 1083 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 TNNQ9UQP3 1299 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 LTN1O94822 1766 aa9.09□□□□□ -0.95
UBE2D3-204ENST00000349311 FAM155AB1AL88 458 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 C9IYK1 514 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 IRX3P78415 501 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 ATF7IPQ6VMQ6 1270 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 PPFIBP1Q86W92 1011 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 ITPRIPQ8IWB1 547 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 CFAP53Q96M91 514 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 SMC4Q9NTJ3 1288 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 MORC2Q9Y6X9 1032 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 RGPD1P0DJD0 1748 aa9.08□□□□□ -0.96
UBE2D3-204ENST00000349311 ACEP12821 1306 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 DLG5Q8TDM6 1919 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 ALS2Q96Q42 1657 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 MST1RQ04912 1400 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 SMTNL1A8MU46 457 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 SHOXO15266 292 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 U2AF2P26368 475 aaKnown RBP eCLIP9.07□□□□□ -0.963e-9■■■□□ 15
UBE2D3-204ENST00000349311 ZNF574Q6ZN55 896 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 TCP11L2Q8N4U5 519 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 SMARCC1Q92922 1105 aaPredicted RBP9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.07□□□□□ -0.965e-7■■■■□ 24.9
UBE2D3-204ENST00000349311 ZBTB40Q9NUA8 1239 aa9.07□□□□□ -0.96
UBE2D3-204ENST00000349311 IL16Q14005 1332 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 TTC21BQ7Z4L5 1316 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 TCHHQ07283 1943 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 SHISA3A0PJX4 238 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 FUT4P22083 530 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 DNAJA1P31689 397 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 ETFBP38117 255 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 CD96P40200 585 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 MCM2P49736 904 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 GP2P55259 537 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 CDKAL1Q5VV42 579 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 CASC1Q6TDU7 716 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 TEX2Q8IWB9 1127 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 KRT222Q8N1A0 295 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 ENOX1Q8TC92 643 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 CPLX3Q8WVH0 158 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 LNPKQ9C0E8 428 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 ZNF408Q9H9D4 720 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 PRR13Q9NZ81 148 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 LMCD1Q9NZU5 365 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 USP25Q9UHP3 1055 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 CTNNA3Q9UI47 895 aa9.06□□□□□ -0.96
UBE2D3-204ENST00000349311 PEAK1Q9H792 1746 aa9.05□□□□□ -0.96
UBE2D3-204ENST00000349311 KIF24Q5T7B8 1368 aa9.05□□□□□ -0.96
UBE2D3-204ENST00000349311 VGLL3A8MV65 326 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms