RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 hCG_1984214I3L0E3 225 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 LCA5LO95447 670 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 CCDC155Q8N6L0 562 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 ZNF713Q8N859 430 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 FGFBP2Q9BYJ0 223 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 ANO9A1A5B4 782 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 ZMYND10O75800 440 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 FKBP15Q5T1M5 1219 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 C2CD5Q86YS7 1000 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 EHBP1Q8NDI1 1231 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 DDX12PQ92771 950 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 DNAJC19Q96DA6 116 aa16.16■□□□□ 0.18
ARHGEF1-202ENST00000347545 PDIA5Q14554 519 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 MAN2A1Q16706 1144 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 GSPT2Q8IYD1 628 aaKnown RBP16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 ADGRF4Q8IZF3 695 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 GBP3Q9H0R5 595 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 SH2D4AQ9H788 454 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 RIC8AQ9NPQ8 531 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 PCDHA13Q9Y5I0 950 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 LRRC53A6NM62 1247 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 EIF4A3P38919 411 aaKnown RBP16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 C2orf54Q08AI8 447 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 ZNF543Q08ER8 600 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 ZCWPW2Q504Y3 356 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 CERS5Q8N5B7 392 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 SALL4Q9UJQ4 1053 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 NRXN2Q9P2S2 1712 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 TUBBP07437 444 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 IDEP14735 1019 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 TNNI2P48788 182 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 KIF11P52732 1056 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 CREG2Q8IUH2 290 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 SECISBP2LQ93073 1101 aaKnown RBP16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 CCDC42Q96M95 316 aa16.15■□□□□ 0.18
ARHGEF1-202ENST00000347545 ABCB11O95342 1321 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 TARSL2A2RTX5 802 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 SERPINB2P05120 415 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 LMAN1P49257 510 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 GTF2IP78347 998 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 KCNMA1Q12791 1236 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 C10orf71Q711Q0 1435 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 EIF3JO75822 258 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 MOCS3O95396 460 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 SYF2O95926 243 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 TMEM266Q2M3C6 531 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 ASTE1Q2TB18 679 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 COG1Q8WTW3 980 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 MXD3Q9BW11 206 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
ARHGEF1-202ENST00000347545 SHMT1P34896 483 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 LRRC63Q05C16 580 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 DDR1Q08345 913 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 KIF5AQ12840 1032 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 CCDC96Q2M329 555 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 MUM1L1Q5H9M0 696 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 PPP4R3AQ6IN85 833 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 TBC1D22AQ8WUA7 517 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 CDK5RAP3Q96JB5 506 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 IFIH1Q9BYX4 1025 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 PNMA6FA0A0J9YX94 578 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 SLC16A2P36021 539 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 CKAP4Q07065 602 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 COASYQ13057 564 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 HGSNATQ68CP4 663 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 HOXA10P31260 410 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 AARSP49588 968 aaKnown RBP eCLIP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 RRAGAQ7L523 313 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 SLF2Q8IX21 1173 aa16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 DDX25Q9UHL0 483 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-202ENST00000347545 USP17L10C9JJH3 530 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 IPO7O95373 1038 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 KRT79Q5XKE5 535 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 PDXDC1Q6P996 788 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 ZNF572Q7Z3I7 529 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 FAM71BQ8TC56 605 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 IQCDQ96DY2 449 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 GDAP1L1Q96MZ0 367 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 TSGA10Q9BZW7 698 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 VIPAS39Q9H9C1 493 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 JADE2Q9NQC1 790 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
ARHGEF1-202ENST00000347545 PCDHA2Q9Y5H9 948 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms