RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 HOOK2Q96ED9 719 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 SPTLC3Q9NUV7 552 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 RGL1Q9NZL6 768 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 PLS1Q14651 629 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 NOC3LQ8WTT2 800 aaKnown RBP19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 WRNIP1Q96S55 665 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 BLOC1S4Q9NUP1 217 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 RWDD2AQ9UIY3 292 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 COPB1P53618 953 aaKnown RBP19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 MTF1Q14872 753 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 LDHDQ86WU2 507 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 TPH2Q8IWU9 490 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 SH2D4AQ9H788 454 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 SAMM50Q9Y512 469 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 LTBP1Q14766 1721 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 PIGOQ8TEQ8 1089 aa19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 COL4A5P29400 1685 aa19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 SP4Q02446 784 aa19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 ADSSL1Q8N142 457 aa19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 CCDC112Q8NEF3 446 aa19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 B4DLN1 442 aa19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 CTTNQ14247 550 aaKnown RBP19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 E4F1Q66K89 784 aaPredicted RBP19.17■□□□□ 0.66
SMARCC2-202ENST00000347471 SFI1A8K8P3 1242 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 MYCLP12524 364 aaPredicted RBP19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 CTAGE1Q96RT6 745 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 ATRNL1Q5VV63 1379 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 AKR1B15C9JRZ8 316 aaPredicted RBP19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 KLRC4O43908 158 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 ANKRD40Q6AI12 368 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 CNNM4Q6P4Q7 775 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 RAD54LQ92698 747 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 SH2D3AQ9BRG2 576 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 LZTFL1Q9NQ48 299 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 DNAI1Q9UI46 699 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 ABCB11O95342 1321 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 TPM2P07951 284 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 TCP11X2Q5H9J9 407 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 PPP4R3AQ6IN85 833 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 GLT8D2Q9H1C3 349 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 NRXN2Q9P2S2 1712 aa19.16■□□□□ 0.66
SMARCC2-202ENST00000347471 SOWAHDA6NJG2 315 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 GCFC2P16383 781 aaKnown RBP19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 CDK5RAP2Q96SN8 1893 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 PLA2G4BP0C869 781 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 CLK2P49760 499 aaKnown RBP19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 FXR2P51116 673 aaKnown RBP eCLIP19.15■□□□□ 0.665e-7■■■■■ 28.4
SMARCC2-202ENST00000347471 PSMC6P62333 389 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 MTMR8Q96EF0 704 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 GGA3Q9NZ52 723 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 ADD3Q9UEY8 706 aaKnown RBP19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 ZHX2Q9Y6X8 837 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 ZNF541Q9H0D2 1346 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 MED24O75448 989 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 NR1I3Q14994 352 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 P2RX5Q93086 422 aa19.15■□□□□ 0.66
SMARCC2-202ENST00000347471 TNS1Q9HBL0 1735 aaKnown RBP19.14■□□□□ 0.66
SMARCC2-202ENST00000347471 ENOX2Q16206 610 aaKnown RBP19.14■□□□□ 0.66
SMARCC2-202ENST00000347471 PPP1R13BQ96KQ4 1090 aa19.14■□□□□ 0.66
SMARCC2-202ENST00000347471 PICK1Q9NRD5 415 aa19.14■□□□□ 0.66
SMARCC2-202ENST00000347471 PANK4Q9NVE7 773 aa19.14■□□□□ 0.66
SMARCC2-202ENST00000347471 TCEAL9Q9UHQ7 104 aa19.14■□□□□ 0.66
SMARCC2-202ENST00000347471 NFIBO00712 420 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 TRIM21P19474 475 aaKnown RBP19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 EIF2AK2P19525 551 aaKnown RBP19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 TRPM4Q8TD43 1214 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 PURBQ96QR8 312 aaKnown RBP19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 A0A1B0GTH6 734 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 TRAF5O00463 557 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 RHOBTB3O94955 611 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 SPAG1Q07617 926 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 AP3B2Q13367 1082 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 FAM83AQ86UY5 434 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 ERMNQ8TAM6 284 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 NOC4LQ9BVI4 516 aaKnown RBP19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 BHMT2Q9H2M3 363 aa19.14■□□□□ 0.65
SMARCC2-202ENST00000347471 EPS15P42566 896 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 TBC1D8BQ0IIM8 1120 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 LRCH2Q5VUJ6 765 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 KIAA0895Q8NCT3 520 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 GIMAP8Q8ND71 665 aaPredicted RBP19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 CNOT6LQ96LI5 555 aaKnown RBP19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 CUEDC2Q9H467 287 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 MRPL11Q9Y3B7 192 aaKnown RBP19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 KRT9P35527 623 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 HMGCS2P54868 508 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 NAA30Q147X3 362 aaPredicted RBP19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 TSR1Q2NL82 804 aaKnown RBP19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 TOGARAM2Q6ZUX3 1019 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 ZBTB39O15060 712 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 MSH4O15457 936 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 GAS7O60861 476 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 FOSP01100 380 aaPredicted RBP19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 FXR1P51114 621 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 TC2NQ8N9U0 490 aa19.13■□□□□ 0.65
SMARCC2-202ENST00000347471 OPLAHO14841 1288 aa19.12■□□□□ 0.65
SMARCC2-202ENST00000347471 USP11P51784 963 aa19.12■□□□□ 0.65
SMARCC2-202ENST00000347471 PRELPP51888 382 aa19.12■□□□□ 0.65
SMARCC2-202ENST00000347471 TUBGCP2Q9BSJ2 902 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms