RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 hCG_1642624A0A1W2PR95 340 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 TGFB3P10600 412 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 BMP8BP34820 402 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 MAGEA10P43363 369 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 PPP1R18Q6NYC8 613 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 XRRA1Q6P2D8 792 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 CPLX2Q6PUV4 134 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 ANKRD33Q7Z3H0 272 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 VSIG10LQ86VR7 867 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 ZSWIM6Q9HCJ5 1215 aa18.13■□□□□ 0.49
TSPAN4-201ENST00000346501 CTAGE5O15320 804 aa18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 RAG1P15918 1043 aa18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 IRX5P78411 483 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 MDM2Q00987 491 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 ITGA7Q13683 1181 aa18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 LAMC2Q13753 1193 aa18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 DHX37Q8IY37 1157 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 CCDC12Q8WUD4 166 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 GDF15Q99988 308 aa18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 CNTNAP5Q8WYK1 1306 aa18.12■□□□□ 0.49
TSPAN4-201ENST00000346501 MKI67P46013 3256 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 A6NJR5 290 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 CPLX1O14810 134 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 ANAPC15P60006 121 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 LY6KQ17RY6 165 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 CCDC62Q6P9F0 684 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 USP17L6PQ6QN14 398 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 NLRX1Q86UT6 975 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 AGXT2Q9BYV1 514 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 PDLIM7Q9NR12 457 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 PDRG1Q9NUG6 133 aa18.11■□□□□ 0.49
TSPAN4-201ENST00000346501 FOSP01100 380 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 SUPT20HL2P0C7V6 817 aa18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 CDC27P30260 824 aa18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 ADD1P35611 737 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 ADCY7P51828 1080 aa18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 DGKDQ16760 1214 aa18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 TRIM22Q8IYM9 498 aa18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 COPS5Q92905 334 aa18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 GPKOWQ92917 476 aaPredicted RBP eCLIP18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 MLXIPQ9HAP2 919 aa18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 DDX41Q9UJV9 622 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-201ENST00000346501 MEIS2O14770 477 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 ARIH2O95376 493 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 CDK7P50613 346 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 PURAQ00577 322 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 ANKRD1Q15327 319 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 TMEM63BQ5T3F8 832 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 PCNX4Q63HM2 1172 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 WWC2Q6AWC2 1192 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 MCTP2Q6DN12 878 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 AFG1LQ8WV93 481 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 CDHR1Q96JP9 859 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
TSPAN4-201ENST00000346501 FRMPD4Q14CM0 1322 aa18.08■□□□□ 0.49
TSPAN4-201ENST00000346501 SMCO2A6NFE2 343 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 KIAA0355O15063 1070 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 FIBPO43427 364 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 SCG2P13521 617 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 PDIA3P30101 505 aaKnown RBP18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 CHMP4BP1P59074 171 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 FAAP100Q0VG06 881 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 NEDD9Q14511 834 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 PFKFB3Q16875 520 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 FAM47CQ5HY64 1035 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 TDHQ8IZJ6 230 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 EMID1Q96A84 441 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 KATNAL1Q9BW62 490 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 RIC8AQ9NPQ8 531 aa18.08■□□□□ 0.48
TSPAN4-201ENST00000346501 NOP56O00567 594 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 PRPF3O43395 683 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 GGPS1O95749 300 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 MMP3P08254 477 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 PTGS1P23219 599 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 GNA11P29992 359 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 EVCP57679 992 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 CCT2P78371 535 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 ARHGAP1Q07960 439 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 FAM126BQ8IXS8 530 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 GIMAP8Q8ND71 665 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 IL31RAQ8NI17 732 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 PPTC7Q8NI37 304 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 BADQ92934 168 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 SPATA33Q96N06 139 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 INPP4AQ96PE3 977 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 PRO3102Q9H379 93 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 C6orf50Q9HD87 102 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 FAM217BQ9NTX9 383 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 RTEL1Q9NZ71 1219 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 PCDHA6Q9UN73 950 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 NOD1Q9Y239 953 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 PCDHA8Q9Y5H6 950 aa18.07■□□□□ 0.48
TSPAN4-201ENST00000346501 NID2Q14112 1375 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 KIAA1217Q5T5P2 1943 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms