RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 MORC4Q8TE76 937 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 LAD1O00515 517 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 PSMC4P43686 418 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 RBL2Q08999 1139 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 ATG9AQ7Z3C6 839 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 DDX25Q9UHL0 483 aaKnown RBP16.91■□□□□ 0.3
SRPK1-201ENST00000346162 APBA3O96018 575 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 POLD1P28340 1107 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 SEL1L2Q5TEA6 688 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 TOGARAM2Q6ZUX3 1019 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 CYB5R4Q7L1T6 521 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 CHURC1Q8WUH1 139 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
SRPK1-201ENST00000346162 PCDHA1Q9Y5I3 950 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 ADAMTS13Q76LX8 1427 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 ICA1Q05084 483 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 SCARF1Q14162 830 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 KIFC2Q96AC6 838 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 EPSTI1Q96J88 318 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 CUEDC2Q9H467 287 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 MAGEF1Q9HAY2 307 aa16.91■□□□□ 0.3
SRPK1-201ENST00000346162 SAMSN1Q9NSI8 373 aaKnown RBP16.91■□□□□ 0.3
SRPK1-201ENST00000346162 GAS7O60861 476 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 HEXIM1O94992 359 aaKnown RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 BAG2O95816 211 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 CYP19A1P11511 503 aaPredicted RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 KRT5P13647 590 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 GSDMBQ8TAX9 411 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 CCDC110Q8TBZ0 833 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 TUBGCP2Q9BSJ2 902 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 PPP1R9AQ9ULJ8 1098 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 RABGAP1Q9Y3P9 1069 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 RPAP1Q9BWH6 1393 aaPredicted RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 SUGP1Q8IWZ8 645 aaKnown RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 COG1Q8WTW3 980 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 DYNLL2Q96FJ2 89 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 KIF9Q9HAQ2 790 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 CASQ2O14958 399 aaPredicted RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 DNAJC8O75937 253 aaPredicted RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 XRCC5P13010 732 aaKnown RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 ANKRD20A3Q5VUR7 823 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 ARMCX5Q6P1M9 558 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 EMBQ6PCB8 327 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 STOX1Q6ZVD7 989 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 HVCN1Q96D96 273 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 LSM14BQ9BX40 385 aaKnown RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 ARMCX3Q9UH62 379 aaPredicted RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 G3BP2Q9UN86 482 aaKnown RBP16.9■□□□□ 0.3
SRPK1-201ENST00000346162 SERPINB2P05120 415 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 ZBTB17Q13105 803 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 WDR44Q5JSH3 913 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 KIFAP3Q92845 792 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 AK8Q96MA6 479 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 GJA3Q9Y6H8 435 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
SRPK1-201ENST00000346162 RASSF10A6NK89 507 aa16.89■□□□□ 0.3
SRPK1-201ENST00000346162 N4BP1O75113 896 aaKnown RBP16.89■□□□□ 0.3
SRPK1-201ENST00000346162 BBOX1O75936 387 aa16.89■□□□□ 0.3
SRPK1-201ENST00000346162 HARSP12081 509 aaKnown RBP16.89■□□□□ 0.3
SRPK1-201ENST00000346162 SLC7A5Q01650 507 aa16.89■□□□□ 0.3
SRPK1-201ENST00000346162 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.3
SRPK1-201ENST00000346162 FBXO11Q86XK2 927 aa16.89■□□□□ 0.3
SRPK1-201ENST00000346162 IL25Q9H293 177 aa16.89■□□□□ 0.3
SRPK1-201ENST00000346162 PANK4Q9NVE7 773 aa16.89■□□□□ 0.3
SRPK1-201ENST00000346162 EXOC7Q9UPT5 735 aa16.89■□□□□ 0.3
SRPK1-201ENST00000346162 NEDD4P46934 1319 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 WDR19Q8NEZ3 1342 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 LRRC31Q6UY01 552 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 GSPT2Q8IYD1 628 aaKnown RBP16.89■□□□□ 0.29
SRPK1-201ENST00000346162 CCDC17Q96LX7 622 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 PICK1Q9NRD5 415 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 HMGB1P1B2RPK0 211 aaPredicted RBP16.89■□□□□ 0.29
SRPK1-201ENST00000346162 PLEKHA8P1O95397 391 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 PTPREP23469 700 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 IRAK1P51617 712 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 CLUL1Q15846 466 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 ASPRV1Q53RT3 343 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 CFAP157Q5JU67 520 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 CFAP57Q96MR6 1250 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 RAB17Q9H0T7 212 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 L2HGDHQ9H9P8 463 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 MIER3Q7Z3K6 550 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 FMR1NBQ8N0W7 255 aaPredicted RBP16.89■□□□□ 0.29
SRPK1-201ENST00000346162 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 RDH13Q8NBN7 331 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 UHMK1Q8TAS1 419 aaKnown RBP16.89■□□□□ 0.29
SRPK1-201ENST00000346162 FBXO41Q8TF61 875 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
SRPK1-201ENST00000346162 CUL3Q13618 768 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 SLFN12Q8IYM2 578 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 CNOT6LQ96LI5 555 aaKnown RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 FUT8Q9BYC5 575 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 GOLPH3LQ9H4A5 285 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 CTTNBP2NLQ9P2B4 639 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms