RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 HIPK3Q9H422 1215 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 SENP2Q9HC62 589 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 MYH6P13533 1939 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 B4GALT4O60513 344 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
TUBD1-203ENST00000346141 ARIH2O95376 493 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 SUPT20HL2P0C7V6 817 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 CSF2RAP15509 400 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 EIF2AK2P19525 551 aaKnown RBP13.8□□□□□ -0.2
TUBD1-203ENST00000346141 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 CASC1Q6TDU7 716 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 SEPT14Q6ZU15 432 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 COPS5Q92905 334 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 PIGSQ96S52 555 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 MAP3K14Q99558 947 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.8□□□□□ -0.2
TUBD1-203ENST00000346141 TRPV6Q9H1D0 765 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
TUBD1-203ENST00000346141 TMEM265A0A087WTH1 108 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 PNMA6FA0A0J9YX94 578 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 DDAH1O94760 285 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 GH1P01241 217 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 NR3C2P08235 984 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 KIF5BP33176 963 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 CYP2C18P33260 490 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 MCM5P33992 734 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 TMTC2Q8N394 836 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 CTCFLQ8NI51 663 aaPredicted RBP13.79□□□□□ -0.2
TUBD1-203ENST00000346141 NOC4LQ9BVI4 516 aaKnown RBP13.79□□□□□ -0.2
TUBD1-203ENST00000346141 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 IL23AQ9NPF7 189 aa13.79□□□□□ -0.2
TUBD1-203ENST00000346141 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.78□□□□□ -0.2
TUBD1-203ENST00000346141 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.78□□□□□ -0.2
TUBD1-203ENST00000346141 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
TUBD1-203ENST00000346141 SLC27A2O14975 620 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 PRC1O43663 620 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 CYTH3O43739 400 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
TUBD1-203ENST00000346141 TMEM240Q5SV17 173 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 TMEM87BQ96K49 555 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 GUCD1Q96NT3 240 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 PDCD2LQ9BRP1 358 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 ANO2Q9NQ90 1003 aa13.78□□□□□ -0.2
TUBD1-203ENST00000346141 A0A0C4DFX4 3053 aa13.77□□□□□ -0.2
TUBD1-203ENST00000346141 SCN10AQ9Y5Y9 1956 aa13.77□□□□□ -0.2
TUBD1-203ENST00000346141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.77□□□□□ -0.21
TUBD1-203ENST00000346141 MMP3P08254 477 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 HOXA13P31271 388 aaPredicted RBP13.77□□□□□ -0.21
TUBD1-203ENST00000346141 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 LY6KQ17RY6 165 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 RASIP1Q5U651 963 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 CREB3L3Q68CJ9 461 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 AFG1LQ8WV93 481 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 EMID1Q96A84 441 aaPredicted RBP13.77□□□□□ -0.21
TUBD1-203ENST00000346141 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
TUBD1-203ENST00000346141 FAM161BQ96MY7 647 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 SPZ1Q9BXG8 430 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 MTIF3Q9H2K0 278 aaKnown RBP13.77□□□□□ -0.21
TUBD1-203ENST00000346141 TRMT13Q9NUP7 481 aaKnown RBP13.77□□□□□ -0.21
TUBD1-203ENST00000346141 DDX41Q9UJV9 622 aaKnown RBP13.77□□□□□ -0.21
TUBD1-203ENST00000346141 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 CUL9Q8IWT3 2517 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 UMODL1Q5DID0 1318 aa13.77□□□□□ -0.21
TUBD1-203ENST00000346141 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
TUBD1-203ENST00000346141 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 SH2B2O14492 632 aaPredicted RBP13.76□□□□□ -0.21
TUBD1-203ENST00000346141 GNAQP50148 359 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 FAM47CQ5HY64 1035 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 IER5LQ5T953 404 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 NFXL1Q6ZNB6 911 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 ZNF365Q70YC5 407 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 SLC17A8Q8NDX2 589 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
TUBD1-203ENST00000346141 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
TUBD1-203ENST00000346141 SEC24BO95487 1268 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 FGBP02675 491 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 CALM1P0DP23 149 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 CALM2P0DP24 149 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 CALM3P0DP25 149 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 ACRP10323 421 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
TUBD1-203ENST00000346141 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
TUBD1-203ENST00000346141 LIFRP42702 1097 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 CCL23P55773 120 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 LAMC2Q13753 1193 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 PGM5Q15124 567 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms