RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.87■□□□□ 0.61
ARID1B-202ENST00000346085 PJA2O43164 708 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 KCNA2P16389 499 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 IL10P22301 178 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 RNPEPQ9H4A4 650 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 STX7O15400 261 aaKnown RBP18.87■□□□□ 0.61
ARID1B-202ENST00000346085 CHEK2O96017 543 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 DNM2P50570 870 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 TPCN1Q9ULQ1 816 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 KHDRBS2Q5VWX1 349 aaKnown RBP18.87■□□□□ 0.61
ARID1B-202ENST00000346085 CALML6Q8TD86 181 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 NFKBIL1Q9UBC1 381 aaPredicted RBP18.87■□□□□ 0.61
ARID1B-202ENST00000346085 STAM2O75886 525 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 HDLBPQ00341 1268 aaKnown RBP18.87■□□□□ 0.61
ARID1B-202ENST00000346085 TRIM25Q14258 630 aaKnown RBP18.87■□□□□ 0.61
ARID1B-202ENST00000346085 ACAD11Q709F0 780 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 MICALL2Q8IY33 904 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 DDI1Q8WTU0 396 aa18.87■□□□□ 0.61
ARID1B-202ENST00000346085 CCDC87Q9NVE4 849 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 HSPA13P48723 471 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 SUN2Q9UH99 717 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 STX12Q86Y82 276 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 GRAMD1AQ96CP6 724 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 FAM161BQ96MY7 647 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 HLA-DOAP06340 250 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 MEFVO15553 781 aaPredicted RBP18.86■□□□□ 0.61
ARID1B-202ENST00000346085 YWHAEP62258 255 aaKnown RBP18.86■□□□□ 0.61
ARID1B-202ENST00000346085 ARMCX4Q5H9R4 360 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 HAUS3Q68CZ6 603 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 FRA10AC1Q70Z53 315 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 ADRM1Q16186 407 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
ARID1B-202ENST00000346085 EPN1Q9Y6I3 576 aaPredicted RBP18.86■□□□□ 0.61
ARID1B-202ENST00000346085 PRPF6O94906 941 aaKnown RBP18.86■□□□□ 0.61
ARID1B-202ENST00000346085 SF3B3Q15393 1217 aaKnown RBP18.86■□□□□ 0.61
ARID1B-202ENST00000346085 CAPN12Q6ZSI9 719 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 SRGAP2BP0DMP2 458 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 ACADSP16219 412 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 PSMA4P25789 261 aaKnown RBP18.86■□□□□ 0.61
ARID1B-202ENST00000346085 NLRP14Q86W24 1093 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 TRIM50Q86XT4 487 aa18.86■□□□□ 0.61
ARID1B-202ENST00000346085 TCHHQ07283 1943 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 HSPA6P17066 643 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 SCP2P22307 547 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 LAMC2Q13753 1193 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 FBXW10Q5XX13 1052 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 MFN1Q8IWA4 741 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 TTC25Q96NG3 672 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 LSM1O15116 133 aaKnown RBP18.85■□□□□ 0.61
ARID1B-202ENST00000346085 IL17RAQ96F46 866 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 NARS2Q96I59 477 aaKnown RBP18.85■□□□□ 0.61
ARID1B-202ENST00000346085 CCT7Q99832 543 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 DLGAP2Q9P1A6 1054 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 SMARCA1P28370 1054 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 PBKQ96KB5 322 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 AARSP49588 968 aaKnown RBP eCLIP18.85■□□□□ 0.613e-6■■■■■ 61.8
ARID1B-202ENST00000346085 TRIM13O60858 407 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 TUBA4AP68366 448 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 ARMC3Q5W041 872 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 SH3BP5LQ7L8J4 393 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 SAT1P21673 171 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 TAF12Q16514 161 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 RUBCNQ92622 972 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 EIF4E1BA6NMX2 242 aaKnown RBP18.85■□□□□ 0.61
ARID1B-202ENST00000346085 NRDE2Q9H7Z3 1164 aa18.85■□□□□ 0.61
ARID1B-202ENST00000346085 NT5C3AQ9H0P0 336 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 AGBL1Q96MI9 1066 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 ECM2O94769 699 aaPredicted RBP18.84■□□□□ 0.61
ARID1B-202ENST00000346085 CPP00450 1065 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 SNAP25P60880 206 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 FCHO2Q0JRZ9 810 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 NR5A1Q13285 461 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 KIF19Q2TAC6 998 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 CCDC134Q9H6E4 229 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 FAM207AQ9NSI2 230 aaPredicted RBP18.84■□□□□ 0.61
ARID1B-202ENST00000346085 NOVA2Q9UNW9 492 aaKnown RBP18.84■□□□□ 0.61
ARID1B-202ENST00000346085 CDH2P19022 906 aaPredicted RBP18.84■□□□□ 0.61
ARID1B-202ENST00000346085 CDC27P30260 824 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 NUP107P57740 925 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 TBCCQ15814 346 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 TRIM45Q9H8W5 580 aaPredicted RBP18.84■□□□□ 0.61
ARID1B-202ENST00000346085 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 SASH1O94885 1247 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 DSG1Q02413 1049 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 KRT17Q04695 432 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 TDRD7Q8NHU6 1098 aaKnown RBP18.84■□□□□ 0.61
ARID1B-202ENST00000346085 LRRC2Q9BYS8 371 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 CABP2Q9NPB3 220 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 DMC1Q14565 340 aa18.84■□□□□ 0.61
ARID1B-202ENST00000346085 KRT87PA6NCN2 255 aa18.83■□□□□ 0.61
ARID1B-202ENST00000346085 CLK1P49759 484 aaKnown RBP18.83■□□□□ 0.61
ARID1B-202ENST00000346085 AP1S2P56377 157 aa18.83■□□□□ 0.61
ARID1B-202ENST00000346085 AKNAD1Q5T1N1 836 aa18.83■□□□□ 0.61
ARID1B-202ENST00000346085 ATP6V1E2Q96A05 226 aa18.83■□□□□ 0.61
ARID1B-202ENST00000346085 ZBTB18Q99592 522 aa18.83■□□□□ 0.61
ARID1B-202ENST00000346085 MOV10L1Q9BXT6 1211 aaKnown RBP18.83■□□□□ 0.61
ARID1B-202ENST00000346085 BIRC5O15392 142 aa18.83■□□□□ 0.61
ARID1B-202ENST00000346085 PRPSAP1Q14558 356 aa18.83■□□□□ 0.61
ARID1B-202ENST00000346085 CENPUQ71F23 418 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms