RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SCAF8Q9UPN6 1271 aaKnown RBP10.47□□□□□ -0.73
ATG4A-202ENST00000345734 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
ATG4A-202ENST00000345734 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 POTEMA6NI47 508 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 BECN2A8MW95 431 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 GOLGA6L19H0YKK7 550 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 SLC1A4P43007 532 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 POSTNQ15063 836 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 NBPF9Q3BBW0 867 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 NUP88Q99567 741 aaPredicted RBP10.46□□□□□ -0.73
ATG4A-202ENST00000345734 NAT10Q9H0A0 1025 aaKnown RBP10.46□□□□□ -0.73
ATG4A-202ENST00000345734 SMCHD1A6NHR9 2005 aa10.46□□□□□ -0.73
ATG4A-202ENST00000345734 ESYT2A0FGR8 921 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 PRELPP51888 382 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 RASSF7Q02833 373 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 PDXDC2PQ6P474 469 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 KRT25Q7Z3Z0 450 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 ZSCAN30Q86W11 494 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 ELOA2Q8IYF1 753 aaPredicted RBP10.46□□□□□ -0.74
ATG4A-202ENST00000345734 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.74
ATG4A-202ENST00000345734 SPC24Q8NBT2 197 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 DCAF4Q8WV16 495 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 JDP2Q8WYK2 163 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 MTMR8Q96EF0 704 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 ZBED3Q96IU2 234 aaPredicted RBP10.46□□□□□ -0.74
ATG4A-202ENST00000345734 ZNF830Q96NB3 372 aaPredicted RBP10.46□□□□□ -0.74
ATG4A-202ENST00000345734 TRIM5Q9C035 493 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.74
ATG4A-202ENST00000345734 MYH7BA7E2Y1 1941 aa10.46□□□□□ -0.74
ATG4A-202ENST00000345734 A0A1W2PRG0 241 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 F5H6K3 240 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 hCG_1984214I3L0E3 225 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 WNT10BO00744 389 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 NDUFB10O96000 172 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 EGFRP00533 1210 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 BMP6P22004 513 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 CDC25AP30304 524 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 ZNF75DP51815 510 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 ADCY7P51828 1080 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 KLRC3Q07444 240 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 NONOQ15233 471 aaKnown RBP eCLIP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 LETM2Q2VYF4 491 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 MIGA2Q7L4E1 593 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 PLA2G4DQ86XP0 818 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 ZNF713Q8N859 430 aaPredicted RBP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 MYOZ2Q9NPC6 264 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 BCCIPQ9P287 314 aaKnown RBP eCLIP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 HERC5Q9UII4 1024 aaKnown RBP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 MAN1B1Q9UKM7 699 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 CD2APQ9Y5K6 639 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 ZBTB5O15062 677 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 CCNT1O60563 726 aaKnown RBP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 ADH1BP00325 375 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 CASP1P29466 404 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 AFMP43652 599 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 SNAP25P60880 206 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 UBE2SQ16763 222 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 ARL6IP4Q66PJ3 421 aaKnown RBP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 MTERF4Q7Z6M4 381 aaKnown RBP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 ZBTB33Q86T24 672 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 PLPP7Q8NBV4 271 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 TBCKQ8TEA7 893 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 BPIFA3Q9BQP9 254 aa10.45□□□□□ -0.74
ATG4A-202ENST00000345734 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 HOOK1Q9UJC3 728 aaKnown RBP10.45□□□□□ -0.74
ATG4A-202ENST00000345734 PP2D1A8MPX8 630 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 SLFN14P0C7P3 912 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 ECE1P42892 770 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 NCAPHQ15003 741 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 QRICH1Q2TAL8 776 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 FKBP1CQ5VVH2 108 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 GMCL1P1Q8NEA9 526 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 NLGN2Q8NFZ4 835 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 ACER1Q8TDN7 264 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 PAGE5Q96GU1 130 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 RIC8AQ9NPQ8 531 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 PGAP2Q9UHJ9 254 aa10.44□□□□□ -0.74
ATG4A-202ENST00000345734 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
ATG4A-202ENST00000345734 EDIL3O43854 480 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 LONP1P36776 959 aaKnown RBP10.43□□□□□ -0.74
ATG4A-202ENST00000345734 SARSP49591 514 aaKnown RBP10.43□□□□□ -0.74
ATG4A-202ENST00000345734 KCNA1Q09470 495 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 CDC37Q16543 378 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-202ENST00000345734 KIAA1755Q5JYT7 1200 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 NT5DC1Q5TFE4 455 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 KANK3Q6NY19 840 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 DTHD1Q6ZMT9 781 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 SH3RF1Q7Z6J0 888 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 NEK8Q86SG6 692 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 STAMQ92783 540 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 SMARCE1Q969G3 411 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 ZKSCAN5Q9Y2L8 839 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L15C9J2P7 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L13C9JLJ4 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
ATG4A-202ENST00000345734 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms