RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 NFE2L3Q9Y4A8 694 aa15.27■□□□□ 0.03
CDC42-202ENST00000344548 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 POTEJP0CG39 1038 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 PTGS1P23219 599 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 HSD17B4P51659 736 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 USP14P54578 494 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
CDC42-202ENST00000344548 ZSCAN30Q86W11 494 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 REPS2Q8NFH8 660 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 L3MBTL3Q96JM7 780 aaPredicted RBP15.26■□□□□ 0.03
CDC42-202ENST00000344548 NAP1L5Q96NT1 182 aaPredicted RBP15.26■□□□□ 0.03
CDC42-202ENST00000344548 AS3MTQ9HBK9 375 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 MYMKA6NI61 221 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 MED24O75448 989 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 FANCCQ00597 558 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 TMEM119Q4V9L6 283 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 CCDC186Q7Z3E2 898 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 CALML4Q96GE6 196 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 CCDC34Q96HJ3 373 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 C12orf42Q96LP6 360 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 ZKSCAN5Q9Y2L8 839 aa15.26■□□□□ 0.03
CDC42-202ENST00000344548 COL11A1P12107 1806 aaPredicted RBP15.25■□□□□ 0.03
CDC42-202ENST00000344548 OTOFQ9HC10 1997 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 POTEB3A0JP26 581 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 ZNF18P17022 549 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 PRCPP42785 496 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 POTEBQ6S5H4 581 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 ENOX1Q8TC92 643 aaKnown RBP15.25■□□□□ 0.03
CDC42-202ENST00000344548 MRFAP1L1Q96HT8 127 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 PAPPA2Q9BXP8 1791 aa15.25■□□□□ 0.03
CDC42-202ENST00000344548 E9PMD0 336 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 EML1O00423 815 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 ARP10275 920 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 ZNF76P36508 570 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 PMS1P54277 932 aaKnown RBP15.24■□□□□ 0.03
CDC42-202ENST00000344548 TREML2Q5T2D2 321 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 ZNF658Q5TYW1 1059 aaPredicted RBP15.24■□□□□ 0.03
CDC42-202ENST00000344548 MCTP2Q6DN12 878 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 DRC7Q8IY82 874 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 INTS13Q9NVM9 706 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 VAV3Q9UKW4 847 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 FCER1AP12319 257 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 PSMC6P62333 389 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 LRMPQ12912 555 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 DYMQ7RTS9 669 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 FAM43AQ8N2R8 423 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 LARP4BQ92615 738 aaKnown RBP15.24■□□□□ 0.03
CDC42-202ENST00000344548 CDCA5Q96FF9 252 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 NAP1L4Q99733 375 aaKnown RBP15.24■□□□□ 0.03
CDC42-202ENST00000344548 C7orf25Q9BPX7 421 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 RAB34Q9BZG1 259 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 ZNF214Q9UL59 606 aaPredicted RBP15.24■□□□□ 0.03
CDC42-202ENST00000344548 KIAA1024Q9UPX6 916 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
CDC42-202ENST00000344548 GLTPD2A6NH11 291 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 C19orf81C9J6K1 198 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 SPATA31C1P0DKV0 1188 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 ITGB5P18084 799 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 ERCC5P28715 1186 aaPredicted RBP15.23■□□□□ 0.03
CDC42-202ENST00000344548 DSG3P32926 999 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 CCT6AP40227 531 aaKnown RBP15.23■□□□□ 0.03
CDC42-202ENST00000344548 RPS6P62753 249 aaKnown RBP15.23■□□□□ 0.03
CDC42-202ENST00000344548 STK4Q13043 487 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 TRAF1Q13077 416 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 TMEM132BQ14DG7 1078 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 EAPPQ56P03 285 aaPredicted RBP15.23■□□□□ 0.03
CDC42-202ENST00000344548 NCAPH2Q6IBW4 605 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 CATSPER3Q86XQ3 398 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
CDC42-202ENST00000344548 SYTL5Q8TDW5 730 aaPredicted RBP15.23■□□□□ 0.03
CDC42-202ENST00000344548 RAD54LQ92698 747 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 TRERF1Q96PN7 1200 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 TAAR1Q96RJ0 339 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 CUEDC2Q9H467 287 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 ADAMTS5Q9UNA0 930 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 TRIM49BA6NDI0 452 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 MEIS1O00470 390 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 RHOBTB3O94955 611 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 POTEGQ6S5H5 508 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.23■□□□□ 0.03
CDC42-202ENST00000344548 SLFN12Q8IYM2 578 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 CDK5RAP3Q96JB5 506 aa15.23■□□□□ 0.03
CDC42-202ENST00000344548 IRF6O14896 467 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 TBX3O15119 743 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 ZBED4O75132 1171 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 CDC25BP30305 580 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 ASIC1P78348 528 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 MRPS9P82933 396 aaKnown RBP15.22■□□□□ 0.03
CDC42-202ENST00000344548 COG2Q14746 738 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 CEP55Q53EZ4 464 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 HYIQ5T013 277 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 USP50Q70EL3 339 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms