RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 GPIHBP1Q8IV16 184 aa23.84■■□□□ 1.41
CCDC38-201ENST00000344280 RHOXF2BP0C7M4 288 aa23.84■■□□□ 1.41
CCDC38-201ENST00000344280 TUBB2AQ13885 445 aa23.84■■□□□ 1.41
CCDC38-201ENST00000344280 GUF1Q8N442 669 aaKnown RBP23.84■■□□□ 1.41
CCDC38-201ENST00000344280 NOA1Q8NC60 698 aaKnown RBP23.84■■□□□ 1.41
CCDC38-201ENST00000344280 RHOXF2Q9BQY4 288 aa23.84■■□□□ 1.41
CCDC38-201ENST00000344280 TUBB2BQ9BVA1 445 aa23.84■■□□□ 1.41
CCDC38-201ENST00000344280 ATF5Q9Y2D1 282 aaPredicted RBP23.84■■□□□ 1.41
CCDC38-201ENST00000344280 PSMD14O00487 310 aa23.83■■□□□ 1.41
CCDC38-201ENST00000344280 ATP1A1P05023 1023 aaKnown RBP23.83■■□□□ 1.41
CCDC38-201ENST00000344280 MRPL12P52815 198 aaKnown RBP23.83■■□□□ 1.41
CCDC38-201ENST00000344280 LONRF2Q1L5Z9 754 aa23.83■■□□□ 1.41
CCDC38-201ENST00000344280 QRICH1Q2TAL8 776 aa23.83■■□□□ 1.41
CCDC38-201ENST00000344280 VWA3BQ502W6 1294 aa23.83■■□□□ 1.41
CCDC38-201ENST00000344280 NDST4Q9H3R1 872 aa23.83■■□□□ 1.41
CCDC38-201ENST00000344280 FAM207AQ9NSI2 230 aaPredicted RBP23.83■■□□□ 1.41
CCDC38-201ENST00000344280 CCDC151A5D8V7 595 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 ZNF263O14978 683 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 EEF2P13639 858 aaKnown RBP23.82■■□□□ 1.4
CCDC38-201ENST00000344280 WHAMMP3Q1A5X7 153 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 FKBP15Q5T1M5 1219 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 LRRC55Q6ZSA7 311 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 DNAJC19Q96DA6 116 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 FGFBP2Q9BYJ0 223 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 UBXN6Q9BZV1 441 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 SIK3Q9Y2K2 1263 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 CTAGE15A4D2H0 777 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 ATP8B1O43520 1251 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 SRGAP2O75044 1071 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 CTAGE8P0CG41 777 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 TRAPPC11Q7Z392 1133 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 KRT26Q7Z3Y9 468 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 KIAA1328Q86T90 577 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 CTAGE6Q86UF2 777 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 CTAGE4Q8IX94 777 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 MSANTD4Q8NCY6 345 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 ZNHIT6Q9NWK9 470 aaKnown RBP23.82■■□□□ 1.4
CCDC38-201ENST00000344280 NRXN2Q9P2S2 1712 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 PCDHA12Q9UN75 941 aa23.82■■□□□ 1.4
CCDC38-201ENST00000344280 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 BRWD3Q6RI45 1802 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 KRT83P78385 493 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 SH3BP5LQ7L8J4 393 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 JAKMIP2Q96AA8 810 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 E9PMD0 336 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 MARCH6O60337 910 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 ALDH1B1P30837 517 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 CYLC1P35663 651 aaPredicted RBP23.81■■□□□ 1.4
CCDC38-201ENST00000344280 SNAP25P60880 206 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 FIGNQ5HY92 759 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 NLGN1Q8N2Q7 840 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 CCDC155Q8N6L0 562 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 ZBTB9Q96C00 473 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 EHD4Q9H223 541 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 ZCCHC17Q9NP64 241 aaKnown RBP23.81■■□□□ 1.4
CCDC38-201ENST00000344280 COL11A2P13942 1736 aaPredicted RBP23.81■■□□□ 1.4
CCDC38-201ENST00000344280 SIPA1L1O43166 1804 aa23.81■■□□□ 1.4
CCDC38-201ENST00000344280 A0A1W2PQJ5 194 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 EIF3CLB5ME19 914 aaKnown RBP23.8■■□□□ 1.4
CCDC38-201ENST00000344280 POLR3GO15318 223 aaPredicted RBP23.8■■□□□ 1.4
CCDC38-201ENST00000344280 SSBP05455 408 aaKnown RBP eCLIP23.8■■□□□ 1.4
CCDC38-201ENST00000344280 MMP10P09238 476 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 COASYQ13057 564 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 BRD3Q15059 726 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 SIAH1Q8IUQ4 282 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 ZDHHC15Q96MV8 337 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 P2RX7Q99572 595 aaKnown RBP23.8■■□□□ 1.4
CCDC38-201ENST00000344280 EIF3CQ99613 913 aaKnown RBP23.8■■□□□ 1.4
CCDC38-201ENST00000344280 SUGCTQ9HAC7 445 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 TBC1D7Q9P0N9 293 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 FAM198AQ9UFP1 575 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 RAB21Q9UL25 225 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 PCDHA1Q9Y5I3 950 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 ARFGEF1Q9Y6D6 1849 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 SLC1A4P43007 532 aa23.8■■□□□ 1.4
CCDC38-201ENST00000344280 CACNB1Q02641 598 aaPredicted RBP23.8■■□□□ 1.4
CCDC38-201ENST00000344280 NPHP3-ACAD11A0A0J9YXS1 232 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 BEND6Q5SZJ8 279 aaPredicted RBP23.79■■□□□ 1.4
CCDC38-201ENST00000344280 MSL1Q68DK7 614 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 CCDC170Q8IYT3 715 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 ZNF622Q969S3 477 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCDC38-201ENST00000344280 ARHGAP20Q9P2F6 1191 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 KIAA1024Q9UPX6 916 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 TAL1P17542 331 aaPredicted RBP23.79■■□□□ 1.4
CCDC38-201ENST00000344280 STAT3P40763 770 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 RBM5P52756 815 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCDC38-201ENST00000344280 VSNL1P62760 191 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 LRRC63Q05C16 580 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 CDC37Q16543 378 aaPredicted RBP23.79■■□□□ 1.4
CCDC38-201ENST00000344280 MAN2A1Q16706 1144 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 CCDC17Q96LX7 622 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 MMRN2Q9H8L6 949 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 PLAGL2Q9UPG8 496 aa23.79■■□□□ 1.4
CCDC38-201ENST00000344280 POTEB3A0JP26 581 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 POTECB2RU33 542 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 KRT86O43790 486 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 RAD51AP2Q09MP3 1159 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 SMC1AQ14683 1233 aaKnown RBP23.78■■□□□ 1.4
CCDC38-201ENST00000344280 SEPT2Q15019 361 aa23.78■■□□□ 1.4
CCDC38-201ENST00000344280 CERKLQ49MI3 558 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms