RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.93
USF2-202ENST00000343550 SEZ6LQ9BYH1 1024 aa20.83■□□□□ 0.93
USF2-202ENST00000343550 WDR11Q9BZH6 1224 aa20.83■□□□□ 0.93
USF2-202ENST00000343550 FAM217BQ9NTX9 383 aaPredicted RBP20.83■□□□□ 0.93
USF2-202ENST00000343550 TMEM265A0A087WTH1 108 aa20.83■□□□□ 0.92
USF2-202ENST00000343550 OPLAHO14841 1288 aa20.83■□□□□ 0.92
USF2-202ENST00000343550 RCAN1P53805 252 aa20.83■□□□□ 0.92
USF2-202ENST00000343550 ANAPC15P60006 121 aa20.83■□□□□ 0.92
USF2-202ENST00000343550 TMEM240Q5SV17 173 aa20.83■□□□□ 0.92
USF2-202ENST00000343550 TMTC3Q6ZXV5 915 aa20.83■□□□□ 0.92
USF2-202ENST00000343550 UPF3BQ9BZI7 483 aaKnown RBP20.83■□□□□ 0.92
USF2-202ENST00000343550 RBM28Q9NW13 759 aaKnown RBP20.83■□□□□ 0.92
USF2-202ENST00000343550 EYSQ5T1H1 3165 aa20.82■□□□□ 0.92
USF2-202ENST00000343550 CYP2C18P33260 490 aa20.82■□□□□ 0.92
USF2-202ENST00000343550 EVCP57679 992 aa20.82■□□□□ 0.92
USF2-202ENST00000343550 RTN1Q16799 776 aa20.82■□□□□ 0.92
USF2-202ENST00000343550 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.82■□□□□ 0.92
USF2-202ENST00000343550 MYLIPQ8WY64 445 aa20.82■□□□□ 0.92
USF2-202ENST00000343550 LRRC37A2A6NM11 1700 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 LCTP09848 1927 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 RBM47A0AV96 593 aaKnown RBP20.81■□□□□ 0.92
USF2-202ENST00000343550 ACRP10323 421 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 CDC27P30260 824 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 PSMC6P62333 389 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 TOB2Q14106 344 aaPredicted RBP20.81■□□□□ 0.92
USF2-202ENST00000343550 PPP2R5BQ15173 497 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 IL17RAQ96F46 866 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 HIPK3Q9H422 1215 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 NAP1L2Q9ULW6 460 aaPredicted RBP20.81■□□□□ 0.92
USF2-202ENST00000343550 GTF3C3Q9Y5Q9 886 aa20.81■□□□□ 0.92
USF2-202ENST00000343550 GOLGA8AA7E2F4 631 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 GOLGA8BA8MQT2 603 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 DNAJB2P25686 324 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 FUT2Q10981 343 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 RASIP1Q5U651 963 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 DNERQ8NFT8 737 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 MAFAQ8NHW3 353 aaPredicted RBP20.8■□□□□ 0.92
USF2-202ENST00000343550 SYTL5Q8TDW5 730 aaPredicted RBP20.8■□□□□ 0.92
USF2-202ENST00000343550 MPHOSPH6Q99547 160 aaKnown RBP20.8■□□□□ 0.92
USF2-202ENST00000343550 TRPV6Q9H1D0 765 aa20.8■□□□□ 0.92
USF2-202ENST00000343550 SEC63Q9UGP8 760 aaKnown RBP20.8■□□□□ 0.92
USF2-202ENST00000343550 CFBP00751 764 aa20.79■□□□□ 0.92
USF2-202ENST00000343550 ADD1P35611 737 aaKnown RBP20.79■□□□□ 0.92
USF2-202ENST00000343550 GHRHRQ02643 423 aa20.79■□□□□ 0.92
USF2-202ENST00000343550 PDE4DQ08499 809 aa20.79■□□□□ 0.92
USF2-202ENST00000343550 PSRC1Q6PGN9 363 aaPredicted RBP20.79■□□□□ 0.92
USF2-202ENST00000343550 TAAR1Q96RJ0 339 aa20.79■□□□□ 0.92
USF2-202ENST00000343550 IL23AQ9NPF7 189 aa20.79■□□□□ 0.92
USF2-202ENST00000343550 PDRG1Q9NUG6 133 aa20.79■□□□□ 0.92
USF2-202ENST00000343550 MAP3K20Q9NYL2 800 aaKnown RBP20.79■□□□□ 0.92
USF2-202ENST00000343550 COL20A1Q9P218 1284 aa20.79■□□□□ 0.92
USF2-202ENST00000343550 hCG_1642624A0A1W2PR95 340 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 B4GALT4O60513 344 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 EDNRBP24530 442 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 PDIA3P30101 505 aaKnown RBP20.78■□□□□ 0.92
USF2-202ENST00000343550 CPT1AP50416 773 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 METAP2P50579 478 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■■■□□ 16.3
USF2-202ENST00000343550 HSD17B4P51659 736 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 SAMD3Q8N6K7 520 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 POLR3EQ9NVU0 708 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 FOSL2P15408 326 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 TIFAQ96CG3 184 aa20.78■□□□□ 0.92
USF2-202ENST00000343550 NOC4LQ9BVI4 516 aaKnown RBP20.78■□□□□ 0.92
USF2-202ENST00000343550 V9GY48 417 aaPredicted RBP20.78■□□□□ 0.92
USF2-202ENST00000343550 UMODL1Q5DID0 1318 aa20.77■□□□□ 0.92
USF2-202ENST00000343550 B4DLN1 442 aa20.77■□□□□ 0.92
USF2-202ENST00000343550 NKRFO15226 690 aaKnown RBP eCLIP20.77■□□□□ 0.926e-6■■□□□ 11.7
USF2-202ENST00000343550 MRPL12P52815 198 aaKnown RBP20.77■□□□□ 0.92
USF2-202ENST00000343550 PURAQ00577 322 aaKnown RBP20.77■□□□□ 0.92
USF2-202ENST00000343550 GRIN2CQ14957 1233 aa20.77■□□□□ 0.92
USF2-202ENST00000343550 OR6J1Q8NGC5 347 aa20.77■□□□□ 0.92
USF2-202ENST00000343550 SCFD2Q8WU76 684 aa20.77■□□□□ 0.92
USF2-202ENST00000343550 LARP6Q9BRS8 491 aaKnown RBP20.77■□□□□ 0.92
USF2-202ENST00000343550 ALDH8A1Q9H2A2 487 aaPredicted RBP20.77■□□□□ 0.92
USF2-202ENST00000343550 ZNF576Q9H609 170 aa20.77■□□□□ 0.92
USF2-202ENST00000343550 CNTNAP5Q8WYK1 1306 aa20.76■□□□□ 0.91
USF2-202ENST00000343550 GRXCR1A8MXD5 290 aa20.76■□□□□ 0.91
USF2-202ENST00000343550 FGBP02675 491 aa20.76■□□□□ 0.91
USF2-202ENST00000343550 MYL3P08590 195 aa20.76■□□□□ 0.91
USF2-202ENST00000343550 CCL23P55773 120 aa20.76■□□□□ 0.91
USF2-202ENST00000343550 NSUN6Q8TEA1 469 aaKnown RBP20.76■□□□□ 0.91
USF2-202ENST00000343550 HERVK_113Q902F9 699 aa20.76■□□□□ 0.91
USF2-202ENST00000343550 ZNF274Q96GC6 653 aaPredicted RBP20.76■□□□□ 0.91
USF2-202ENST00000343550 RMDN3Q96TC7 470 aa20.76■□□□□ 0.91
USF2-202ENST00000343550 NID2Q14112 1375 aa20.75■□□□□ 0.91
USF2-202ENST00000343550 GCOM1H8Y6P7 765 aaPredicted RBP20.75■□□□□ 0.91
USF2-202ENST00000343550 POLR2MP0CAP2 368 aa20.75■□□□□ 0.91
USF2-202ENST00000343550 HOXA13P31271 388 aaPredicted RBP20.75■□□□□ 0.91
USF2-202ENST00000343550 PBX2P40425 430 aa20.75■□□□□ 0.91
USF2-202ENST00000343550 BRDTQ58F21 947 aaPredicted RBP20.75■□□□□ 0.91
USF2-202ENST00000343550 MTG1Q9BT17 334 aaPredicted RBP20.75■□□□□ 0.91
USF2-202ENST00000343550 PBX4Q9BYU1 374 aa20.75■□□□□ 0.91
USF2-202ENST00000343550 PRUNE2Q8WUY3 3088 aa20.74■□□□□ 0.91
USF2-202ENST00000343550 SUPT20HL2P0C7V6 817 aa20.74■□□□□ 0.91
USF2-202ENST00000343550 TXNP10599 105 aaKnown RBP20.74■□□□□ 0.91
USF2-202ENST00000343550 CCT2P78371 535 aaKnown RBP20.74■□□□□ 0.91
USF2-202ENST00000343550 IWS1Q96ST2 819 aa20.74■□□□□ 0.91
USF2-202ENST00000343550 COL25A1Q9BXS0 654 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms