RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 TESK2Q96S53 571 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 IPO11Q9UI26 975 aaKnown RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 PTK2Q05397 1052 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 KIF9Q9HAQ2 790 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 THEGQ9P2T0 379 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 PDE6BP35913 854 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 DLGAP5Q15398 846 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 BBOF1Q8ND07 529 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 CLCN6P51797 869 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 DARS2Q6PI48 645 aaKnown RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 PDZD4Q76G19 769 aaPredicted RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 RAB44Q7Z6P3 723 aaPredicted RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 MRFAP1Q9Y605 127 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 DEPDC1BQ8WUY9 529 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 EXT2Q93063 718 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 CHL1O00533 1208 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 TBC1D1Q86TI0 1168 aaPredicted RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 EAF2Q96CJ1 260 aaPredicted RBP13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
SEMA6A-202ENST00000343348 KRT1P04264 644 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 KCTD1Q719H9 257 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 NCAPG2Q86XI2 1143 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 TRIML1Q8N9V2 468 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 CDC25BP30305 580 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 ALKBH8Q96BT7 664 aaKnown RBP13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 NHEJ1Q9H9Q4 299 aaPredicted RBP13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 ACSL3O95573 720 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 MFAP3P55082 362 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 GNPTABQ3T906 1256 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 CERKLQ49MI3 558 aaPredicted RBP13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 C10orf76Q5T2E6 689 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 KCTD6Q8NC69 237 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 ADPGKQ9BRR6 497 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 CALN1Q9BXU9 219 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 H0Y3Z8 333 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 Q3C1V9 767 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 GRAMD1BQ3KR37 738 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 M0R2C6 588 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 MT-ND3P03897 115 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 PDHA1P08559 390 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 PDE6AP16499 860 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 DYDC2Q96IM9 177 aa13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 UBE2TQ9NPD8 197 aaPredicted RBP13.18□□□□□ -0.3
SEMA6A-202ENST00000343348 ECEL1O95672 775 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 KITP10721 976 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ADORA1P30542 326 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 POLR2BP30876 1174 aaKnown RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ZBTB17Q13105 803 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 CSRNP1Q96S65 589 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ABCB6Q9NP58 842 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 EVI5O60447 810 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 LRRC23Q53EV4 343 aaPredicted RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 PI4K2BQ8TCG2 481 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ELAC2Q9BQ52 826 aaKnown RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 LPXNO60711 386 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 KRT10P13645 584 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 LONP1P36776 959 aaKnown RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ARHGEF18Q6ZSZ5 1173 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 KIAA0825Q8IV33 1275 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 SLC38A10Q9HBR0 1119 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 APBA1Q02410 837 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 C7orf31Q8N865 590 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 CEP19Q96LK0 163 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 RUNDC3BQ96NL0 473 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 PFDN6O15212 129 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 AFPP02771 609 aaKnown RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ESRRAP11474 423 aaPredicted RBP13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 OSTNP61366 133 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 ITSN2Q9NZM3 1697 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 NR1D1P20393 614 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms