RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 SPDYE3A6NKU9 549 aa15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CTAGE5O15320 804 aa15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GNA11P29992 359 aa15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CLK2P49760 499 aaKnown RBP15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 RABEP1Q15276 862 aa15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ME3Q16798 604 aa15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LENG1Q96BZ8 264 aaPredicted RBP15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 INPP4AQ96PE3 977 aaPredicted RBP15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 AP5M1Q9H0R1 490 aa15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 EHMT1Q9H9B1 1298 aa15.01□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ZEB2O60315 1214 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 RGS20O76081 388 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 C6orf222P0C671 652 aaPredicted RBP15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ICAM3P32942 547 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 STK3Q13188 491 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SNX17Q15036 470 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GNPTABQ3T906 1256 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 BICD2Q8TD16 824 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GTF3C6Q969F1 213 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 EMID1Q96A84 441 aaPredicted RBP15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 TBC1D32Q96NH3 1257 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LARP6Q9BRS8 491 aaKnown RBP15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 BACH2Q9BYV9 841 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 C6orf50Q9HD87 102 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LIMCH1Q9UPQ0 1083 aa15□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CABYRO75952 493 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 TXNP10599 105 aaKnown RBP14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ACLYP53396 1101 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 KCNA10Q16322 511 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 NOL8Q76FK4 1167 aaKnown RBP14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 IL31RAQ8NI17 732 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SEZ6LQ9BYH1 1024 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SENP6Q9GZR1 1112 aaPredicted RBP14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 DDX41Q9UJV9 622 aaKnown RBP14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ELP1O95163 1332 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 FRMPD3Q5JV73 1810 aa14.99□□□□□ -0.01
HLA-DQA1-201ENST00000343139 A6NJR5 290 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 MAFGO15525 162 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 DYNC1LI2O43237 492 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 MYCLP12524 364 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CPT1AP50416 773 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 MRPS9P82933 396 aaKnown RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 FSCN1Q16658 493 aaKnown RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 UBE2SQ16763 222 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 BRDTQ58F21 947 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GNASQ5JWF2 1037 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GALNT17Q6IS24 598 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SEPT14Q6ZU15 432 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SH2B1Q9NRF2 756 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 MRVI1Q9Y6F6 885 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 A0A1W2PQ45 241 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 A0A1W2PQY0 241 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 MYADML2A6NDP7 307 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 KPNA6O60684 536 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ARIH2O95376 493 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GH1P01241 217 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SLC39A5Q6ZMH5 540 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 WASF1Q92558 559 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CDHR1Q96JP9 859 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 NR2E3Q9Y5X4 410 aa14.98□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SPATA31C2B4DYI2 1134 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 FIBPO43427 364 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ST18O60284 1047 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CTDNEP1O95476 244 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ASGR1P07306 291 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SREBF1P36956 1147 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LAMC2Q13753 1193 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 TMEM63BQ5T3F8 832 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 NLRX1Q86UT6 975 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 REXO1Q8N1G1 1221 aaKnown RBP14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 DAGLBQ8NCG7 672 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 OR6J1Q8NGC5 347 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 DPF3Q92784 378 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GPRASP2Q96D09 838 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 GLT1D1Q96MS3 346 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 SENP7Q9BQF6 1050 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 POLR3EQ9NVU0 708 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 MCM3APO60318 1980 aa14.97□□□□□ -0.01
HLA-DQA1-201ENST00000343139 TNRC18O15417 2968 aaPredicted RBP14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 EVI5O60447 810 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LARGE1O95461 756 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 XBP1P17861 261 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ARHGAP1Q07960 439 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LY6KQ17RY6 165 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LRRC26Q2I0M4 334 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CRYGNQ8WXF5 182 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 ANO3Q9BYT9 981 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 VPS54Q9P1Q0 977 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 UBIAD1Q9Y5Z9 338 aa14.96□□□□□ -0.01
HLA-DQA1-201ENST00000343139 CYP3A4P08684 503 aa14.95□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NEDD9Q14511 834 aa14.95□□□□□ -0.02
HLA-DQA1-201ENST00000343139 GIMAP8Q8ND71 665 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQA1-201ENST00000343139 NSUN7Q8NE18 718 aaKnown RBP14.95□□□□□ -0.02
HLA-DQA1-201ENST00000343139 PPTC7Q8NI37 304 aa14.95□□□□□ -0.02
HLA-DQA1-201ENST00000343139 TOX2Q96NM4 488 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms