RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 UNC13DQ70J99 1090 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 NLRX1Q86UT6 975 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 NSUN4Q96CB9 384 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 MROH7-TTC4A0A0A0MT08 1334 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 USP17L5A8MUK1 530 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 TCP10L2B9ZVM9 353 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 GOLGA8KD6RF30 607 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 UBE2Q2LH0YL09 131 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 GDF11O95390 407 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 GRIN1Q05586 938 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 FAM186BQ8IYM0 893 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 STAG2Q8N3U4 1231 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 DBNDD1Q9H9R9 158 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 RNF14Q9UBS8 474 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 A0A1B0GTH6 734 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 CLIC2O15247 247 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 MRPS25P82663 173 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 LRCH2Q5VUJ6 765 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 COL15A1P39059 1388 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 PNMA6FA0A0J9YX94 578 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 PVALEFA0A1B0GWK0 134 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 K7ENM7 598 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 AFPP02771 609 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 CALRP27797 417 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 NF2P35240 595 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 TMC4Q7Z404 712 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 SUPT20HQ8NEM7 779 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 UHMK1Q8TAS1 419 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 FERMT1Q9BQL6 677 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 BHMT2Q9H2M3 363 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 PCDHA13Q9Y5I0 950 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 HGSO14964 777 aaPredicted RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 SRGAP2O75044 1071 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 ZBED4O75132 1171 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 CD19P15391 556 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 APBA1Q02410 837 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 C2orf54Q08AI8 447 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 STRN3Q13033 797 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 GRM4Q14833 912 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 ALKBH5Q6P6C2 394 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 MRRFQ96E11 262 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 CEP95Q96GE4 821 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 ANO3Q9BYT9 981 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 AGXT2Q9BYV1 514 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 ADD3Q9UEY8 706 aaKnown RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 FEZ2Q9UHY8 353 aaPredicted RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 MORC2Q9Y6X9 1032 aaPredicted RBP7.88□□□□□ -1.15
VCAN-202ENST00000342785 APBA3O96018 575 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 FERP16591 822 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 TNNI1P19237 187 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 CCT5P48643 541 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 SETDB1Q15047 1291 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 XKR9Q5GH70 373 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 TBC1D9BQ66K14 1250 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 DCUN1D2Q6PH85 259 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 TC2NQ8N9U0 490 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 MSANTD4Q8NCY6 345 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 CSRNP1Q96S65 589 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 PHF20Q9BVI0 1012 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 USP32Q8NFA0 1604 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 RGS16O15492 202 aaPredicted RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 BMP3P12645 472 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 FXR1P51114 621 aaKnown RBP eCLIP7.87□□□□□ -1.15
VCAN-202ENST00000342785 PTPAQ15257 358 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 CLUL1Q15846 466 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 PNMA8AQ86V59 439 aaPredicted RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 BARHL2Q9NY43 387 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 TESPA1A2RU30 521 aaPredicted RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 CTIFO43310 598 aaKnown RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 SEPT2Q15019 361 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 NKX1-1Q15270 411 aaPredicted RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 C12orf60Q5U649 245 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 TTC19Q6DKK2 380 aaPredicted RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 NYAP1Q6ZVC0 841 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 ZC3H13Q5T200 1668 aaKnown RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 ANO9A1A5B4 782 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 PPEF1O14829 653 aaPredicted RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 VPS41P49754 854 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 LIG3P49916 1009 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 HNRNPH2P55795 449 aaKnown RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 CCDC6Q16204 474 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 DENND2CQ68D51 928 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 TEKT3Q9BXF9 490 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 STK32BQ9NY57 414 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L15C9J2P7 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L13C9JLJ4 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L11C9JVI0 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L18D6R9N7 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L22D6RA61 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L17D6RBQ6 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L19D6RCP7 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L20D6RJB6 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 ATP5DP30049 168 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 ALDH3A1P30838 453 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L24Q0WX57 530 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 SF3B3Q15393 1217 aaKnown RBP7.87□□□□□ -1.15
VCAN-202ENST00000342785 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
VCAN-202ENST00000342785 USP17L6PQ6QN14 398 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms