RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CKAP4Q07065 602 aaKnown RBP13.88□□□□□ -0.19
LMX1A-202ENST00000342310 TRIM14Q14142 442 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 FAM26FQ5R3K3 315 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 NT5DC1Q5TFE4 455 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 APTXQ7Z2E3 356 aaKnown RBP13.88□□□□□ -0.19
LMX1A-202ENST00000342310 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 REXO2Q9Y3B8 237 aaKnown RBP13.88□□□□□ -0.19
LMX1A-202ENST00000342310 PCDHA13Q9Y5I0 950 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 PCDHAC2Q9Y5I4 1007 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 TNS2Q63HR2 1409 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 PDE2AO00408 941 aaPredicted RBP13.87□□□□□ -0.19
LMX1A-202ENST00000342310 ARHGAP25P42331 645 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 ADAM9Q13443 819 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
LMX1A-202ENST00000342310 MYOCDQ8IZQ8 938 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 EEF1GP26641 437 aaKnown RBP13.87□□□□□ -0.19
LMX1A-202ENST00000342310 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
LMX1A-202ENST00000342310 TPH2Q8IWU9 490 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 EPB41L5Q9HCM4 733 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 NFU1Q9UMS0 254 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 ORC4O43929 436 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 GCNT3O95395 438 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 KCNJ6P48051 423 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 ZBED6P86452 979 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 EHBP1Q8NDI1 1231 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 FAM76AQ8TAV0 307 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 SELENOOQ9BVL4 669 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 USP21Q9UK80 565 aa13.87□□□□□ -0.19
LMX1A-202ENST00000342310 SERPINB2P05120 415 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 MNAT1P51948 309 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 ARL6IP4Q66PJ3 421 aaKnown RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 IQCEQ6IPM2 695 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 LRRC15Q8TF66 581 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 DPH5Q9H2P9 285 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 FEZ2Q9UHY8 353 aaPredicted RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 THRAP3Q9Y2W1 955 aaKnown RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 HLA-DOAP06340 250 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 CYP2J2P51589 502 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 GRM4Q14833 912 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 SEMA6BQ9H3T3 888 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 VEZTQ9HBM0 779 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 SPATA31A1Q5TZJ5 1347 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 MRC1P22897 1456 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 FAM237AA0A1B0GTK4 181 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 SPDYE3A6NKU9 549 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 TRIM37O94972 964 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 WDR59Q6PJI9 974 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 CCDC84Q86UT8 332 aaPredicted RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 SYCP3Q8IZU3 236 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 DUSP9Q99956 384 aaKnown RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 ANAPC4Q9UJX5 808 aa13.86□□□□□ -0.19
LMX1A-202ENST00000342310 CHD2O14647 1828 aaKnown RBP13.86□□□□□ -0.19
LMX1A-202ENST00000342310 HSF2BPO75031 334 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 LRRN2O75325 713 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 KRT14P02533 472 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 NR2F2P24468 414 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 ACTN2P35609 894 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 NFIAQ12857 509 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 SLC9C1Q4G0N8 1177 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 VWA3BQ502W6 1294 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 CT47A1Q5JQC4 288 aaPredicted RBP13.85□□□□□ -0.19
LMX1A-202ENST00000342310 RBM26Q5T8P6 1007 aaKnown RBP13.85□□□□□ -0.19
LMX1A-202ENST00000342310 TTI2Q6NXR4 508 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 CLEC4GQ6UXB4 293 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 PHLDB2Q86SQ0 1253 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 BCAS4Q8TDM0 211 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 TBCAO75347 108 aaKnown RBP13.85□□□□□ -0.19
LMX1A-202ENST00000342310 GNGT1P63211 74 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 SFMBT2Q5VUG0 894 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 ELMO3Q96BJ8 720 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 NOX5Q96PH1 765 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 CLRN2A0PK11 232 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 PDCLQ13371 301 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 PACSIN1Q9BY11 444 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 L1RE1Q9UN81 338 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 FLT1P17948 1338 aa13.85□□□□□ -0.19
LMX1A-202ENST00000342310 FGFR1OPO95684 399 aaKnown RBP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 VAV2P52735 878 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 TTC31Q49AM3 519 aaPredicted RBP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 CFAP58Q5T655 872 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 ADGRF4Q8IZF3 695 aa13.84□□□□□ -0.19
LMX1A-202ENST00000342310 GIMAP8Q8ND71 665 aaPredicted RBP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 UBLCP1Q8WVY7 318 aaPredicted RBP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 DHTKD1Q96HY7 919 aaPredicted RBP13.84□□□□□ -0.19
LMX1A-202ENST00000342310 PPANQ9NQ55 473 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms