RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 RPAP3Q9H6T3 665 aaPredicted RBP14.61□□□□□ -0.07
COL18A1-201ENST00000342220 VCPKMTQ9H867 229 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 GPRC5DQ9NZD1 345 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 GDAQ9Y2T3 454 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 IGKV6D-41A0A0C4DH26 115 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 FKBP1AP62942 108 aaKnown RBP14.61□□□□□ -0.07
COL18A1-201ENST00000342220 FAM193AP78312 1265 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 DCAF4Q8WV16 495 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 PAGE5Q96GU1 130 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 ELP3Q9H9T3 547 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 MAN1B1Q9UKM7 699 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 CCT6AP40227 531 aaKnown RBP14.6□□□□□ -0.07
COL18A1-201ENST00000342220 MYL5Q02045 173 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 TNFRSF25Q93038 417 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 MRIQ9BWK5 157 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 CTNND2Q9UQB3 1225 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 BMP15O95972 392 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 CHMP4BP1P59074 171 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 NUDT12Q9BQG2 462 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 MCM6Q14566 821 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 KRT79Q5XKE5 535 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 MAP1SQ66K74 1059 aaPredicted RBP14.6□□□□□ -0.07
COL18A1-201ENST00000342220 EEPD1Q7L9B9 569 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 SGIP1Q9BQI5 828 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 BCCIPQ9P287 314 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL18A1-201ENST00000342220 NFE2L3Q9Y4A8 694 aa14.6□□□□□ -0.07
COL18A1-201ENST00000342220 FAM170AA1A519 330 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 DCAF15Q66K64 600 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 SH2D4AQ9H788 454 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 TMX2Q9Y320 296 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 ECM29Q5VYK3 1845 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 NFIBO00712 420 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 NRDCO43847 1150 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 ARHGAP4P98171 946 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 LRRC41Q15345 812 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 BANK1Q8NDB2 785 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 WNK4Q96J92 1243 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 SH3GLB2Q9NR46 395 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 TIAM2Q8IVF5 1701 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 TESPA1A2RU30 521 aaPredicted RBP14.59□□□□□ -0.07
COL18A1-201ENST00000342220 TRIM66O15016 1216 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 ERCC6LQ2NKX8 1250 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 NEK11Q8NG66 645 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 SAMSN1Q9NSI8 373 aaKnown RBP14.59□□□□□ -0.07
COL18A1-201ENST00000342220 KIAA1024Q9UPX6 916 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 MYH1P12882 1939 aa14.59□□□□□ -0.07
COL18A1-201ENST00000342220 FZD9O00144 591 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 CYP2C19P33261 490 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 NOP2P46087 812 aaKnown RBP14.58□□□□□ -0.08
COL18A1-201ENST00000342220 PCMTD1Q96MG8 357 aaPredicted RBP14.58□□□□□ -0.08
COL18A1-201ENST00000342220 L2HGDHQ9H9P8 463 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 SLC39A2Q9NP94 309 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 ABCB11O95342 1321 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 FAM237AA0A1B0GTK4 181 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 GCOM1H8Y6P7 765 aaPredicted RBP14.58□□□□□ -0.08
COL18A1-201ENST00000342220 POLR2MP0CAP2 368 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 POTEIP0CG38 1075 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 POTEJP0CG39 1038 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 BMP6P22004 513 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 CLMNQ96JQ2 1002 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 MYCBPQ99417 103 aaPredicted RBP14.58□□□□□ -0.08
COL18A1-201ENST00000342220 RIC8AQ9NPQ8 531 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 CSADQ9Y600 493 aa14.58□□□□□ -0.08
COL18A1-201ENST00000342220 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
COL18A1-201ENST00000342220 FAM83AQ86UY5 434 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 KCNJ6P48051 423 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 TRAPPC10P48553 1259 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 PDE4DQ08499 809 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 PABPC4Q13310 644 aaKnown RBP eCLIP14.57□□□□□ -0.082e-8■■■■□ 19.9
COL18A1-201ENST00000342220 TPH2Q8IWU9 490 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 TMOD4Q9NZQ9 345 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 DNAI1Q9UI46 699 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 POTEB3A0JP26 581 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 TRIM49BA6NDI0 452 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 SFI1A8K8P3 1242 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 POTECB2RU33 542 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 E9PMD0 336 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 CBFA2T2O43439 604 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 ACTN4O43707 911 aaKnown RBP14.57□□□□□ -0.08
COL18A1-201ENST00000342220 SNHG28P0DPA3 235 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 VCAM1P19320 739 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 RPS12P25398 132 aaKnown RBP14.57□□□□□ -0.08
COL18A1-201ENST00000342220 POTEBQ6S5H4 581 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 VSTM4Q8IW00 320 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 PIGOQ8TEQ8 1089 aa14.57□□□□□ -0.08
COL18A1-201ENST00000342220 NELFCDQ8IXH7 590 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 FAM177A1Q8N128 213 aaPredicted RBP14.56□□□□□ -0.08
COL18A1-201ENST00000342220 CCDC43Q96MW1 224 aaKnown RBP14.56□□□□□ -0.08
COL18A1-201ENST00000342220 RAB34Q9BZG1 259 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 DISC1Q9NRI5 854 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 RGL1Q9NZL6 768 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 NPHP3-ACAD11A0A0J9YXS1 232 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 POTEFA5A3E0 1075 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 ICE2Q659A1 982 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 GALNT17Q6IS24 598 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 POTEEQ6S8J3 1075 aa14.56□□□□□ -0.08
COL18A1-201ENST00000342220 GPC2Q8N158 579 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms