RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 NUP88Q99567 741 aaPredicted RBP16.81■□□□□ 0.28
TPM3-208ENST00000341485 MMTAG2Q9BU76 263 aaKnown RBP16.81■□□□□ 0.28
TPM3-208ENST00000341485 PRDM10Q9NQV6 1147 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 GGA3Q9NZ52 723 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 TMX2Q9Y320 296 aa16.81■□□□□ 0.28
TPM3-208ENST00000341485 ZBTB5O15062 677 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 TECP42680 631 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 ERVK-24P63145 666 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 ARHGAP29Q52LW3 1261 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 DCAF15Q66K64 600 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 ACER1Q8TDN7 264 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 COA7Q96BR5 231 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 HOOK2Q96ED9 719 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 IRX2Q9BZI1 471 aaPredicted RBP16.8■□□□□ 0.28
TPM3-208ENST00000341485 ABHD10Q9NUJ1 306 aa16.8■□□□□ 0.28
TPM3-208ENST00000341485 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
TPM3-208ENST00000341485 UBXN1Q04323 297 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 ORC2Q13416 577 aaPredicted RBP16.79■□□□□ 0.28
TPM3-208ENST00000341485 STIM1Q13586 685 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 TRIM14Q14142 442 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 NBPF12Q5TAG4 269 aaPredicted RBP16.79■□□□□ 0.28
TPM3-208ENST00000341485 TTI2Q6NXR4 508 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 SPICE1Q8N0Z3 855 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 TRIM9Q9C026 710 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 THAP9Q9H5L6 903 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 LZTFL1Q9NQ48 299 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 MRFAP1Q9Y605 127 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 ATAD5Q96QE3 1844 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 PHF20L1A8MW92 1017 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 PSMA7O14818 248 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 EDIL3O43854 480 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 ZYXQ15942 572 aaKnown RBP16.79■□□□□ 0.28
TPM3-208ENST00000341485 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 UBXN4Q92575 508 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 ZNF446Q9NWS9 450 aa16.79■□□□□ 0.28
TPM3-208ENST00000341485 EFCAB8A8MWE9 144 aa16.78■□□□□ 0.28
TPM3-208ENST00000341485 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
TPM3-208ENST00000341485 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
TPM3-208ENST00000341485 ADCY7P51828 1080 aa16.78■□□□□ 0.28
TPM3-208ENST00000341485 CDC37Q16543 378 aaPredicted RBP16.78■□□□□ 0.28
TPM3-208ENST00000341485 TMTC1Q8IUR5 882 aa16.78■□□□□ 0.28
TPM3-208ENST00000341485 ACRBPQ8NEB7 543 aa16.78■□□□□ 0.28
TPM3-208ENST00000341485 MTMR8Q96EF0 704 aa16.78■□□□□ 0.28
TPM3-208ENST00000341485 MTMR9Q96QG7 549 aa16.78■□□□□ 0.28
TPM3-208ENST00000341485 DUSP9Q99956 384 aaKnown RBP16.78■□□□□ 0.28
TPM3-208ENST00000341485 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
TPM3-208ENST00000341485 LGALS16A8MUM7 142 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 HIRAP54198 1017 aaPredicted RBP16.77■□□□□ 0.28
TPM3-208ENST00000341485 GPR162Q16538 588 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 QRICH1Q2TAL8 776 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 SYDE2Q5VT97 1194 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 MB21D1Q8N884 522 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 ZNF507Q8TCN5 953 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 DHTKD1Q96HY7 919 aaPredicted RBP16.77■□□□□ 0.28
TPM3-208ENST00000341485 VCPKMTQ9H867 229 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 ADARB2Q9NS39 739 aaKnown RBP16.77■□□□□ 0.28
TPM3-208ENST00000341485 GINM1Q9NU53 330 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 EXOC1Q9NV70 894 aa16.77■□□□□ 0.28
TPM3-208ENST00000341485 SLC37A4O43826 429 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.27
TPM3-208ENST00000341485 KRT9P35527 623 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 TXKP42681 527 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 ASIC1P78348 528 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 PPP2R3AQ06190 1150 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 PDE4DQ08499 809 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.27
TPM3-208ENST00000341485 FAM53CQ9NYF3 392 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 PPP2R3BQ9Y5P8 575 aa16.77■□□□□ 0.27
TPM3-208ENST00000341485 PPP1R11O60927 126 aaPredicted RBP16.76■□□□□ 0.27
TPM3-208ENST00000341485 TDP2O95551 362 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 CLCN6P51797 869 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 STK4Q13043 487 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 GRB10Q13322 594 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 CALCRLQ16602 461 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 FAM83BQ5T0W9 1011 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 DPY19L2Q6NUT2 758 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 NOC3LQ8WTT2 800 aaKnown RBP16.76■□□□□ 0.27
TPM3-208ENST00000341485 P2RX5Q93086 422 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 A0A1W2PQC6 194 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 FCER1AP12319 257 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
TPM3-208ENST00000341485 CCNE1P24864 410 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 STAT2P52630 851 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 CCDC47Q96A33 483 aaKnown RBP16.76■□□□□ 0.27
TPM3-208ENST00000341485 CALML4Q96GE6 196 aa16.76■□□□□ 0.27
TPM3-208ENST00000341485 TTC26A0AVF1 554 aa16.75■□□□□ 0.27
TPM3-208ENST00000341485 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■■□□ 15.5
TPM3-208ENST00000341485 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
TPM3-208ENST00000341485 ANKRD40Q6AI12 368 aa16.75■□□□□ 0.27
TPM3-208ENST00000341485 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
TPM3-208ENST00000341485 CUL5Q93034 780 aa16.75■□□□□ 0.27
TPM3-208ENST00000341485 PNMA5Q96PV4 448 aa16.75■□□□□ 0.27
TPM3-208ENST00000341485 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
TPM3-208ENST00000341485 BLOC1S4Q9NUP1 217 aa16.75■□□□□ 0.27
TPM3-208ENST00000341485 MAGEC2Q9UBF1 373 aaPredicted RBP16.75■□□□□ 0.27
TPM3-208ENST00000341485 KIF5CO60282 957 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms