RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 HOOK2Q96ED9 719 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 PRIMPOLQ96LW4 560 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 PNMA5Q96PV4 448 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 P2RX7Q99572 595 aaKnown RBP11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 EHD4Q9H223 541 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 BCAS3Q9H6U6 928 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 ZBTB39O15060 712 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 PSMC6P62333 389 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 SYCP1Q15431 976 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 TC2NQ8N9U0 490 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 SMCR8Q8TEV9 937 aaPredicted RBP11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 FAM151AQ8WW52 585 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 HAS1Q92839 578 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 PURBQ96QR8 312 aaKnown RBP11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 CCSER1Q9C0I3 900 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 LAD1O00515 517 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 ENTPD3O75355 529 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 SPP2Q13103 211 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 TUBGCP2Q9BSJ2 902 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 PANK4Q9NVE7 773 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 MAST2Q6P0Q8 1798 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 FAM86B1E9PN63 330 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 FAM86B2P0C5J1 330 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 MTMR2Q13614 643 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 NBPF12Q5TAG4 269 aaPredicted RBP11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 CNNM4Q6P4Q7 775 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 P2RX5Q93086 422 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 AK8Q96MA6 479 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 BHMT2Q9H2M3 363 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 NLRC4Q9NPP4 1024 aa11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
RBFOX1-202ENST00000340209 PEX10O60683 326 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 PLA2G4BP0C869 781 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 ADSSL1Q8N142 457 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 FGFBP2Q9BYJ0 223 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 ADD3Q9UEY8 706 aaKnown RBP11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 GUCA1BQ9UMX6 200 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 RNF225M0QZC1 329 aaPredicted RBP11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 MED24O75448 989 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 KCNA3P22001 575 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 NAP1L1P55209 391 aaKnown RBP11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 ELF2Q15723 593 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 RAD54LQ92698 747 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 GCOM1H8Y6P7 765 aaPredicted RBP11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 MEIS2O14770 477 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 ZSCAN12O43309 604 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 POLR2MP0CAP2 368 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 NR1I3Q14994 352 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 DCAF17Q5H9S7 520 aaPredicted RBP11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 TEX35Q5T0J7 233 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 WDR78Q5VTH9 848 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 KSR1Q8IVT5 923 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 LRRN4CLQ8ND94 238 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 PKNOX2Q96KN3 472 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 EPC1Q9H2F5 836 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 KBTBD4Q9NVX7 518 aa11.33□□□□□ -0.6
RBFOX1-202ENST00000340209 SMCHD1A6NHR9 2005 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 A0A1B0GTH6 734 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 KLRC4O43908 158 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 HDLBPQ00341 1268 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 FAM26FQ5R3K3 315 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 TATDN1Q6P1N9 297 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 KIAA0895Q8NCT3 520 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 WRNIP1Q96S55 665 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 HACL1Q9UJ83 578 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 RSPH10B2B2RC85 870 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 GAS7O60861 476 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 GYPCP04921 128 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 VIL1P09327 827 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 RSPH10BP0C881 870 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 PRPHP41219 470 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 SPAG1Q07617 926 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 ZNF569Q5MCW4 686 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 FKBP15Q5T1M5 1219 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 ANGEL2Q5VTE6 544 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 LRCH2Q5VUJ6 765 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 RDH13Q8NBN7 331 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 SPATA20Q8TB22 786 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 IKZF4Q9H2S9 585 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 ESYT2A0FGR8 921 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 DYNC1I1O14576 645 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 CLIC2O15247 247 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 TBCAO75347 108 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 TFRCP02786 760 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 CASQ1P31415 396 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 APBA1Q02410 837 aa11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 TDRD12Q587J7 1177 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-202ENST00000340209 RAD9BQ6WBX8 426 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms