RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 AKR1A1P14550 325 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 CAPN2P17655 700 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 SREBF1P36956 1147 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 USP11P51784 963 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 MTFR1Q15390 333 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 SEPT14Q6ZU15 432 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 DIS3L2Q8IYB7 885 aaKnown RBP13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 TRPV1Q8NER1 839 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 RASGRP4Q8TDF6 673 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 SCFD2Q8WU76 684 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 FRMPD4Q14CM0 1322 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 BTBD18B2RXH4 712 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 M0R2N6 131 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 MAFGO15525 162 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 CYP3A4P08684 503 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 PDIA4P13667 645 aaKnown RBP13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 NPY5RQ15761 445 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 CCDC144BQ3MJ40 725 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 TAPT1Q6NXT6 567 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 FBXO16Q8IX29 292 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 IL31RAQ8NI17 732 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 ABHD8Q96I13 439 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 KATNBL1Q9H079 304 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 MGAMO43451 1857 aa13.58□□□□□ -0.24
SPTLC1-202ENST00000337841 DOCK3Q8IZD9 2030 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 ZSWIM8A7E2V4 1837 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 ZNF236Q9UL36 1845 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 ADAMTS3O15072 1205 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 GJB1P08034 283 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 TXNP10599 105 aaKnown RBP13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 TGFB3P10600 412 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 RARBP10826 455 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 TBCKQ8TEA7 893 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 CDHR1Q96JP9 859 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 DEFB118Q96PH6 123 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 NAP1L4Q99733 375 aaKnown RBP13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 MXRA8Q9BRK3 442 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 SPC25Q9HBM1 224 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 PDGFCQ9NRA1 345 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 UBIAD1Q9Y5Z9 338 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 MRVI1Q9Y6F6 885 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 SMCHD1A6NHR9 2005 aa13.57□□□□□ -0.24
SPTLC1-202ENST00000337841 PLXNB2O15031 1838 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 NKRFO15226 690 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 DUSP11O75319 330 aaKnown RBP13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 SGPL1O95470 568 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 TFRCP02786 760 aaKnown RBP13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 ANP32AP39687 249 aaKnown RBP13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 ADCYAP1R1P41586 468 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 NR5A1Q13285 461 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 MCTP1Q6DN14 999 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 SPRYD3Q8NCJ5 442 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 ZFP91Q96JP5 570 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 AP5M1Q9H0R1 490 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 JADE2Q9NQC1 790 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 PAK6Q9NQU5 681 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 Q9Y3F1 56 aa13.56□□□□□ -0.24
SPTLC1-202ENST00000337841 CCDC85CA6NKD9 419 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 SPATA31C2B4DYI2 1134 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 MEIS1O00470 390 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 DYNC1LI2O43237 492 aaPredicted RBP13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 FIBPO43427 364 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 SMPD1P17405 629 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 ICAM3P32942 547 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 CIITAP33076 1130 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 INF2Q27J81 1249 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 CCDC62Q6P9F0 684 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 ARRDC4Q8NCT1 418 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 CRYGNQ8WXF5 182 aa13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
SPTLC1-202ENST00000337841 MYH6P13533 1939 aa13.54□□□□□ -0.24
SPTLC1-202ENST00000337841 ZNFX1Q9P2E3 1918 aaKnown RBP13.54□□□□□ -0.24
SPTLC1-202ENST00000337841 RGS20O76081 388 aa13.54□□□□□ -0.24
SPTLC1-202ENST00000337841 ITGB5P18084 799 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms