RNA–Protein interactions for RNA: ENST00000337318.7

FAM53B-202, Transcript of family with sequence similarity 53 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53B, Length 5,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-202ENST00000337318 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
FAM53B-202ENST00000337318 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
FAM53B-202ENST00000337318 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L15C9J2P7 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L13C9JLJ4 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L11C9JVI0 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L18D6R9N7 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L22D6RA61 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L17D6RBQ6 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L19D6RCP7 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L20D6RJB6 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 PPP6R2O75170 966 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 USP17L24Q0WX57 530 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 CPLX4Q7Z7G2 160 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 OTUD5Q96G74 571 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
FAM53B-202ENST00000337318 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 LDHAP00338 332 aaKnown RBP17.11■□□□□ 0.33
FAM53B-202ENST00000337318 SRGAP2BP0DMP2 458 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 EXOC3L4Q17RC7 722 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 SH3RF3Q8TEJ3 882 aaPredicted RBP17.11■□□□□ 0.33
FAM53B-202ENST00000337318 LRRC4Q9HBW1 653 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
FAM53B-202ENST00000337318 SPATA31A1Q5TZJ5 1347 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 GSPT1P15170 499 aaKnown RBP17.1■□□□□ 0.33
FAM53B-202ENST00000337318 C1orf228Q6PIY5 440 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 DSTYKQ6XUX3 929 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 THEM5Q8N1Q8 247 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 UTYO14607 1347 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 TNPO2O14787 897 aaKnown RBP17.1■□□□□ 0.33
FAM53B-202ENST00000337318 RHOXF2BP0C7M4 288 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 RCSD1Q6JBY9 416 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 GSDMAQ96QA5 445 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 RHOXF2Q9BQY4 288 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 EIF3CLB5ME19 914 aaKnown RBP17.1■□□□□ 0.33
FAM53B-202ENST00000337318 ERCC3P19447 782 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
FAM53B-202ENST00000337318 NME8Q8N427 588 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 EIF3CQ99613 913 aaKnown RBP17.1■□□□□ 0.33
FAM53B-202ENST00000337318 TPD52P55327 224 aaPredicted RBP17.1■□□□□ 0.33
FAM53B-202ENST00000337318 MCPH1Q8NEM0 835 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 RMDN3Q96TC7 470 aa17.1■□□□□ 0.33
FAM53B-202ENST00000337318 PUS7LQ9H0K6 701 aaKnown RBP17.1■□□□□ 0.33
FAM53B-202ENST00000337318 CIITAP33076 1130 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 MTMR3Q13615 1198 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 DHTKD1Q96HY7 919 aaPredicted RBP17.09■□□□□ 0.33
FAM53B-202ENST00000337318 USP28Q96RU2 1077 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 PHKA2P46019 1235 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 ARPP19P56211 112 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 KRT76Q01546 638 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 FAM83BQ5T0W9 1011 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 TTC1Q99614 292 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 ACAD9Q9H845 621 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 CBX8Q9HC52 389 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 ERCC6L2Q5T890 1561 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 CYP21A2P08686 494 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 GPSM2P81274 684 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 TFAMQ00059 246 aaKnown RBP17.09■□□□□ 0.33
FAM53B-202ENST00000337318 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 DONSONQ9NYP3 566 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 SERPINA10Q9UK55 444 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 PHBP35232 272 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
FAM53B-202ENST00000337318 RNF139Q8WU17 664 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
FAM53B-202ENST00000337318 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
FAM53B-202ENST00000337318 RNF146Q9NTX7 359 aa17.09■□□□□ 0.33
FAM53B-202ENST00000337318 A0A1W2PQ27 194 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 A0A1W2PQ64 194 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 A0A1W2PQD8 194 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 ZBTB5O15062 677 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 THAP12O43422 761 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 PSMD2Q13200 908 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 FAM186BQ8IYM0 893 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 KRT222Q8N1A0 295 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 PRPF38AQ8NAV1 312 aaKnown RBP17.08■□□□□ 0.33
FAM53B-202ENST00000337318 OSBP2Q969R2 916 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 FAM149B1Q96BN6 582 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 TRERF1Q96PN7 1200 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 ZFYVE28Q9HCC9 887 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 LMNB1P20700 586 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 SPP2Q13103 211 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 TRMT44Q8IYL2 757 aaKnown RBP17.08■□□□□ 0.33
FAM53B-202ENST00000337318 PARK7Q99497 189 aaKnown RBP17.08■□□□□ 0.33
FAM53B-202ENST00000337318 LMCD1Q9NZU5 365 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 RGS12O14924 1447 aa17.08■□□□□ 0.33
FAM53B-202ENST00000337318 IQGAP3Q86VI3 1631 aa17.08■□□□□ 0.32
FAM53B-202ENST00000337318 BRD1O95696 1058 aa17.08■□□□□ 0.32
FAM53B-202ENST00000337318 H2AFZP0C0S5 128 aa17.08■□□□□ 0.32
FAM53B-202ENST00000337318 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms