RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PCYT1AP49585 367 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 ALCAMQ13740 583 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 ZKSCAN8Q15776 578 aaPredicted RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 CDHR1Q96JP9 859 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 ANGPTL3Q9Y5C1 460 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 PTPRKQ15262 1439 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 ECEL1O95672 775 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 SLFN13Q68D06 897 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 RFX6Q8HWS3 928 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 POMGNT1Q8WZA1 660 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 LARP4BQ92615 738 aaKnown RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 ANLNQ9NQW6 1124 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 PSMD2Q13200 908 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 SURF1Q15526 300 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 ZNF496Q96IT1 587 aaPredicted RBP14.18□□□□□ -0.14
HLCS-201ENST00000336648 MAP3K7O43318 606 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 GTF2IP78347 998 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 PTGDRQ13258 359 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 SLC12A6Q9UHW9 1150 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 ATP8B3O60423 1300 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 P2RX5Q93086 422 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 SLC39A2Q9NP94 309 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 PCDHA4Q9UN74 947 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 DLATP10515 647 aaKnown RBP14.18□□□□□ -0.14
HLCS-201ENST00000336648 EHHADHQ08426 723 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 ODR4Q5SWX8 454 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 PAWRQ96IZ0 340 aaKnown RBP14.18□□□□□ -0.14
HLCS-201ENST00000336648 NACC1Q96RE7 527 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 STAP2Q9UGK3 403 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 LMTK3Q96Q04 1460 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 HNRNPCL2B2RXH8 293 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 MCF2LO15068 1137 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 HNRNPCL1O60812 293 aaKnown RBP14.18□□□□□ -0.14
HLCS-201ENST00000336648 PDIA3P30101 505 aaKnown RBP14.18□□□□□ -0.14
HLCS-201ENST00000336648 MSH2P43246 934 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 ALS2CLQ60I27 953 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 FGFR1OP2Q9NVK5 253 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 MRFAP1Q9Y605 127 aa14.18□□□□□ -0.14
HLCS-201ENST00000336648 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 CPP00450 1065 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 RPS6KC1Q96S38 1066 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 PACSIN2Q9UNF0 486 aaPredicted RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 GNGT2O14610 69 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 DEUP1Q05D60 604 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 TAF11Q15544 211 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 COPRSQ9NQ92 184 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 RRP15Q9Y3B9 282 aaKnown RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 A0A0D9SFI3 127 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 hCG_1642624A0A1W2PR95 340 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 IPO5O00410 1097 aaKnown RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 MAPK4P31152 587 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 USP14P54578 494 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 CCNA1P78396 465 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 IQCB1Q15051 598 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 TTLL7Q6ZT98 887 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 METTL23Q86XA0 190 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 PPP1R13BQ96KQ4 1090 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 SKIP12755 728 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 NDUFA8P51970 172 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 FKBP3Q00688 224 aaKnown RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 ARHGEF6Q15052 776 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 ZNF658Q5TYW1 1059 aaPredicted RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 SERPINI1Q99574 410 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 TSC22D3Q99576 134 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 ZNF408Q9H9D4 720 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 DIS3Q9Y2L1 958 aaKnown RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 PCDHB4Q9Y5E5 795 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 LRRIQ4A6NIV6 560 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 SGK1O00141 431 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 SERPINI2O75830 405 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 ST13P4Q8IZP2 240 aaPredicted RBP14.17□□□□□ -0.14
HLCS-201ENST00000336648 ANO3Q9BYT9 981 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 ANGPTL2Q9UKU9 493 aa14.17□□□□□ -0.14
HLCS-201ENST00000336648 PALMDQ9NP74 551 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 HEXIM1O94992 359 aaKnown RBP14.16□□□□□ -0.14
HLCS-201ENST00000336648 RASSF7Q02833 373 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 PDE11AQ9HCR9 933 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 PCDHA1Q9Y5I3 950 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 FGAP02671 866 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 ADD1P35611 737 aaKnown RBP14.16□□□□□ -0.14
HLCS-201ENST00000336648 ARL4AP40617 200 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 RAPH1Q70E73 1250 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 THAP9Q9H5L6 903 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 TLK1Q9UKI8 766 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 RNF123Q5XPI4 1314 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 HNRNPDLO14979 420 aaKnown RBP14.16□□□□□ -0.14
HLCS-201ENST00000336648 NR2F2P24468 414 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 BTDP43251 543 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 FAM186BQ8IYM0 893 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 N4BP2L2Q92802 583 aaPredicted RBP14.16□□□□□ -0.14
HLCS-201ENST00000336648 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 CCDC127Q96BQ5 260 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
HLCS-201ENST00000336648 GIMAP4Q9NUV9 329 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms