RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
C9orf47-201ENST00000334490 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
C9orf47-201ENST00000334490 EP400NLQ6ZTU2 488 aa16.49■□□□□ 0.23
C9orf47-201ENST00000334490 EXOC8Q8IYI6 725 aa16.49■□□□□ 0.23
C9orf47-201ENST00000334490 ZBTB9Q96C00 473 aa16.49■□□□□ 0.23
C9orf47-201ENST00000334490 CCDC51Q96ER9 411 aa16.49■□□□□ 0.23
C9orf47-201ENST00000334490 MTA3Q9BTC8 594 aa16.49■□□□□ 0.23
C9orf47-201ENST00000334490 ABL1P00519 1130 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 RPS6KA1Q15418 735 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 KIAA1524Q8TCG1 905 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 STMN4Q9H169 189 aaPredicted RBP16.48■□□□□ 0.23
C9orf47-201ENST00000334490 PARP2Q9UGN5 583 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 XPOTO43592 962 aaKnown RBP16.48■□□□□ 0.23
C9orf47-201ENST00000334490 PLCG1P19174 1290 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 MARK3P27448 753 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
C9orf47-201ENST00000334490 RESTQ13127 1097 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 EXOC3L4Q17RC7 722 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 C12orf60Q5U649 245 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 ACCSQ96QU6 501 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 LY9Q9HBG7 655 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 PLA2G4BP0C869 781 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 CTTNQ14247 550 aaKnown RBP16.48■□□□□ 0.23
C9orf47-201ENST00000334490 STXBP2Q15833 593 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 C8orf74Q6P047 294 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 SYCE1Q8N0S2 351 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 CNOT6LQ96LI5 555 aaKnown RBP16.48■□□□□ 0.23
C9orf47-201ENST00000334490 TIGD1Q96MW7 591 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 TUBBP07437 444 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 NLRP7Q8WX94 980 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 SPATA31D1Q6ZQQ2 1576 aa16.48■□□□□ 0.23
C9orf47-201ENST00000334490 DCCP43146 1447 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 TRERF1Q96PN7 1200 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 CAPN9O14815 690 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 TLR3O15455 904 aaKnown RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 EVCP57679 992 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 PPP2R3AQ06190 1150 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 TUBGCP2Q9BSJ2 902 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 TRIM31Q9BZY9 425 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 CLIC2O15247 247 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 ACTN4O43707 911 aaKnown RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 STK10O94804 968 aaKnown RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 ARL6IP4Q66PJ3 421 aaKnown RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 MICALCLQ6ZW33 695 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 GPR161Q8N6U8 529 aaKnown RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 PPP1R16BQ96T49 567 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 PARVGQ9HBI0 331 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 PIK3CAP42336 1068 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 IFRD2Q12894 506 aaPredicted RBP16.47■□□□□ 0.23
C9orf47-201ENST00000334490 QRICH1Q2TAL8 776 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 P2RX5Q93086 422 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 PCIF1Q9H4Z3 704 aa16.47■□□□□ 0.23
C9orf47-201ENST00000334490 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
C9orf47-201ENST00000334490 ORC4O43929 436 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 MTMR1Q13613 665 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 PPP1R21Q6ZMI0 780 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 FAM186BQ8IYM0 893 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 NSUN6Q8TEA1 469 aaKnown RBP16.46■□□□□ 0.23
C9orf47-201ENST00000334490 MXD3Q9BW11 206 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
C9orf47-201ENST00000334490 MST1RQ04912 1400 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 PSMC2P35998 433 aaKnown RBP16.46■□□□□ 0.23
C9orf47-201ENST00000334490 PDE6CP51160 858 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 GRM4Q14833 912 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 WDR19Q8NEZ3 1342 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 COPB1P53618 953 aaKnown RBP16.46■□□□□ 0.23
C9orf47-201ENST00000334490 HMGCS2P54868 508 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.23
C9orf47-201ENST00000334490 NT5C1BQ96P26 610 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 RIC8AQ9NPQ8 531 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 ASIC3Q9UHC3 531 aa16.46■□□□□ 0.23
C9orf47-201ENST00000334490 CFAP58Q5T655 872 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 PLCD4Q9BRC7 762 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
C9orf47-201ENST00000334490 CD2APQ9Y5K6 639 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 ZSCAN20P17040 1043 aaPredicted RBP16.45■□□□□ 0.22
C9orf47-201ENST00000334490 TMEM206Q9H813 350 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 PRKAG2Q9UGJ0 569 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 TTLL3Q9Y4R7 772 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 DPCR1Q3MIW9 517 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 SCYL2Q6P3W7 929 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 DAAM2Q86T65 1068 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 EMILIN3Q9NT22 766 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 NDC80O14777 642 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 MYL1P05976 194 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 RCAN1P53805 252 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 MYL7Q01449 175 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
C9orf47-201ENST00000334490 NSMCE1Q8WV22 266 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 UBLCP1Q8WVY7 318 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms