RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 DDX42Q86XP3 938 aaKnown RBP eCLIP13.72□□□□□ -0.21
KPNA4-201ENST00000334256 RFX6Q8HWS3 928 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 DCTN3O75935 186 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 CYTH2Q99418 400 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 GNAT2P19087 354 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 PTGDRQ13258 359 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 SIX6OS1Q8N1H7 587 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 AHCYL2Q96HN2 611 aaKnown RBP13.72□□□□□ -0.21
KPNA4-201ENST00000334256 DYDC2Q96IM9 177 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 TFDP1Q14186 410 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 SMAD1Q15797 465 aaKnown RBP13.72□□□□□ -0.21
KPNA4-201ENST00000334256 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 ARHGAP10A1A4S6 786 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 GPC4O75487 556 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 PSMC5P62195 406 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 EN1Q05925 392 aaPredicted RBP13.72□□□□□ -0.21
KPNA4-201ENST00000334256 KYNUQ16719 465 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 RAB42Q8N4Z0 105 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 VCAM1P19320 739 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 AKT1P31749 480 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 ZNF394Q53GI3 561 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 CCDC92Q53HC0 331 aaPredicted RBP13.72□□□□□ -0.21
KPNA4-201ENST00000334256 KRT77Q7Z794 578 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 SENP2Q9HC62 589 aa13.72□□□□□ -0.21
KPNA4-201ENST00000334256 HMGB1P1B2RPK0 211 aaPredicted RBP13.71□□□□□ -0.21
KPNA4-201ENST00000334256 ORC4O43929 436 aa13.71□□□□□ -0.21
KPNA4-201ENST00000334256 HMBSP08397 361 aa13.71□□□□□ -0.21
KPNA4-201ENST00000334256 SNAP25P60880 206 aa13.71□□□□□ -0.21
KPNA4-201ENST00000334256 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.71□□□□□ -0.212e-22■□□□□ 8.3
KPNA4-201ENST00000334256 DNAJC8O75937 253 aaPredicted RBP13.71□□□□□ -0.21
KPNA4-201ENST00000334256 ATP1A1P05023 1023 aaKnown RBP13.71□□□□□ -0.21
KPNA4-201ENST00000334256 DARSP14868 501 aaKnown RBP13.71□□□□□ -0.21
KPNA4-201ENST00000334256 GUCA1AP43080 201 aaPredicted RBP13.71□□□□□ -0.21
KPNA4-201ENST00000334256 ADD3Q9UEY8 706 aaKnown RBP13.71□□□□□ -0.21
KPNA4-201ENST00000334256 THAP12O43422 761 aa13.71□□□□□ -0.21
KPNA4-201ENST00000334256 CTDSPL2Q05D32 466 aa13.71□□□□□ -0.21
KPNA4-201ENST00000334256 RAB20Q9NX57 234 aa13.71□□□□□ -0.21
KPNA4-201ENST00000334256 SGK1O00141 431 aa13.71□□□□□ -0.22
KPNA4-201ENST00000334256 GPR1P46091 355 aa13.71□□□□□ -0.22
KPNA4-201ENST00000334256 LAYNQ6UX15 382 aa13.71□□□□□ -0.22
KPNA4-201ENST00000334256 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.22
KPNA4-201ENST00000334256 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.22
KPNA4-201ENST00000334256 GOLGA8SH3BPF8 625 aa13.71□□□□□ -0.22
KPNA4-201ENST00000334256 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.22
KPNA4-201ENST00000334256 COPB2P35606 906 aa13.71□□□□□ -0.22
KPNA4-201ENST00000334256 GRM8O00222 908 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 ADCY7P51828 1080 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 NACC1Q96RE7 527 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 STRIP2Q9ULQ0 834 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 C16orf87Q6PH81 154 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 SMCO2A6NFE2 343 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 TADA2AO75478 443 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 GUCA1CO95843 209 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 PPP3CCP48454 512 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 DNM1Q05193 864 aaKnown RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 EXOC8Q8IYI6 725 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 THOC1Q96FV9 657 aaKnown RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 E5RI56 91 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 SH3BP5LQ7L8J4 393 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 NFKBIZQ9BYH8 718 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 PHBP35232 272 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 GTF2H3Q13889 308 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 CCDC90BQ9GZT6 254 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 DDX28Q9NUL7 540 aaKnown RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 SCOCQ9UIL1 159 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 DBR1Q9UK59 544 aaKnown RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 ATP6V1C1P21283 382 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 EDEM3Q9BZQ6 932 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.7□□□□□ -0.221e-323■□□□□ 10.8
KPNA4-201ENST00000334256 TNIKQ9UKE5 1360 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 GDF11O95390 407 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 CTSHP09668 335 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 ALDH18A1P54886 795 aaKnown RBP13.7□□□□□ -0.22
KPNA4-201ENST00000334256 TIMM10P62072 90 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 MIS18BP1Q6P0N0 1132 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 SLC26A7Q8TE54 656 aa13.7□□□□□ -0.22
KPNA4-201ENST00000334256 POC1B-GALNT4F8VUJ3 575 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 LMNAP02545 664 aaKnown RBP13.69□□□□□ -0.22
KPNA4-201ENST00000334256 CYP4A11Q02928 519 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 RCSD1Q6JBY9 416 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 CEP68Q76N32 757 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
KPNA4-201ENST00000334256 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
KPNA4-201ENST00000334256 DDX5P17844 614 aaKnown RBP13.69□□□□□ -0.22
KPNA4-201ENST00000334256 KDELC2Q7Z4H8 507 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 CATSPER3Q86XQ3 398 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 KIAA2013Q8IYS2 634 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 EPC1Q9H2F5 836 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
KPNA4-201ENST00000334256 CATSPER4Q7RTX7 472 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms