RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ZNF569Q5MCW4 686 aa12.36□□□□□ -0.43
POLR1B-202ENST00000333990 ZNF280CQ8ND82 737 aa12.36□□□□□ -0.43
POLR1B-202ENST00000333990 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
POLR1B-202ENST00000333990 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
POLR1B-202ENST00000333990 WDR64B1ANS9 1081 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 H0YHG0 523 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 NMT2O60551 498 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 TNNC1P63316 161 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 FKBP3Q00688 224 aaKnown RBP12.35□□□□□ -0.43
POLR1B-202ENST00000333990 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
POLR1B-202ENST00000333990 HMGCS2P54868 508 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 ARHGAP4P98171 946 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 DCUN1D2Q6PH85 259 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 ABI1Q8IZP0 508 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 GJA10Q969M2 543 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 FAM81BQ96LP2 452 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 DEFB129Q9H1M3 183 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 PARVGQ9HBI0 331 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 PCDHB6Q9Y5E3 794 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 ARHGEF37A1IGU5 675 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 PABPN1LA6NDY0 278 aaKnown RBP12.35□□□□□ -0.43
POLR1B-202ENST00000333990 GNAT1P11488 350 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 SFNP31947 248 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 TTC16Q8NEE8 873 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 MCPH1Q8NEM0 835 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 OR8K1Q8NGG5 319 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 TCP11Q8WWU5 503 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 KAZALD1Q96I82 304 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 TSNARE1Q96NA8 513 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
POLR1B-202ENST00000333990 KIF13AQ9H1H9 1805 aa12.35□□□□□ -0.43
POLR1B-202ENST00000333990 ASB14A6NK59 587 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 ANKRD13AQ8IZ07 590 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 VCPKMTQ9H867 229 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 PRKAG2Q9UGJ0 569 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 ZNF543Q08ER8 600 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 SNAPC2Q13487 334 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 TTLL4Q14679 1199 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 CCDC155Q8N6L0 562 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 RNF34Q969K3 372 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 FAM207AQ9NSI2 230 aaPredicted RBP12.34□□□□□ -0.43
POLR1B-202ENST00000333990 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 CTNND1O60716 968 aaKnown RBP12.34□□□□□ -0.43
POLR1B-202ENST00000333990 USP11P51784 963 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 MTERF2Q49AM1 385 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 KCNV1Q6PIU1 500 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 UBL4BQ8N7F7 174 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 HESX1Q9UBX0 185 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 POLLQ9UGP5 575 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 COMMD10Q9Y6G5 202 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 PDS5AQ29RF7 1337 aaKnown RBP12.34□□□□□ -0.43
POLR1B-202ENST00000333990 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 PLA2G4BP0C869 781 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 HOXA10P31260 410 aaPredicted RBP12.34□□□□□ -0.43
POLR1B-202ENST00000333990 BPIFB4P59827 614 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
POLR1B-202ENST00000333990 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 CTTNBP2NLQ9P2B4 639 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 CAMTA1Q9Y6Y1 1673 aa12.34□□□□□ -0.43
POLR1B-202ENST00000333990 NDUFB10O96000 172 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 FGFR2P21802 821 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 PTPREP23469 700 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 EEF1GP26641 437 aaKnown RBP12.33□□□□□ -0.44
POLR1B-202ENST00000333990 EXOSC10Q01780 885 aaKnown RBP12.33□□□□□ -0.44
POLR1B-202ENST00000333990 ARHGAP44Q17R89 818 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 RRAGAQ7L523 313 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 CCDC127Q96BQ5 260 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 ZDHHC15Q96MV8 337 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
POLR1B-202ENST00000333990 SURF1Q15526 300 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 CLUL1Q15846 466 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 ZNF827Q17R98 1081 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 SYCE1Q8N0S2 351 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 NACA2Q9H009 215 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 ELP3Q9H9T3 547 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 DLATP10515 647 aaKnown RBP12.33□□□□□ -0.44
POLR1B-202ENST00000333990 NR2F2P24468 414 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 PSMC2P35998 433 aaKnown RBP12.33□□□□□ -0.44
POLR1B-202ENST00000333990 SNAP25P60880 206 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 JAKMIP2Q96AA8 810 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 MMP19Q99542 508 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
POLR1B-202ENST00000333990 NUB1Q9Y5A7 615 aa12.33□□□□□ -0.44
POLR1B-202ENST00000333990 TLR3O15455 904 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 SLU7O95391 586 aaKnown RBP12.32□□□□□ -0.44
POLR1B-202ENST00000333990 SMARCA1P28370 1054 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms