RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 GCOM1H8Y6P7 765 aaPredicted RBP14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 PDE8BO95263 885 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 BMP15O95972 392 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 CSF1RP07333 972 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 MYZAPP0CAP1 466 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 ARID5AQ03989 594 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 GLE1Q53GS7 698 aaKnown RBP14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 ADGRA1Q86SQ6 560 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 CD302Q8IX05 232 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 TMTC2Q8N394 836 aa14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.03
CCDC88C-201ENST00000331194 EME2A4GXA9 379 aaPredicted RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 GOLGA6L10A6NI86 522 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 EIF4E1BA6NMX2 242 aaKnown RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 SARNPP82979 210 aaKnown RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 ZNF844Q08AG5 666 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 MAP3K12Q12852 859 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 MYO1EQ12965 1108 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 CRYMQ14894 314 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 PPP1R7Q15435 360 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 TDRD12Q587J7 1177 aaKnown RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 IFIT1BQ5T764 474 aaKnown RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 RETREG2Q8NC44 543 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 TCP11Q8WWU5 503 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 NOX5Q96PH1 765 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 TACO1Q9BSH4 297 aaKnown RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 MYH2Q9UKX2 1941 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 FAM170AA1A519 330 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 CTNNA1P35221 906 aaKnown RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 PEX19P40855 299 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 CACNA2D3Q8IZS8 1091 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 UBLCP1Q8WVY7 318 aaPredicted RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 ACTR5Q9H9F9 607 aaPredicted RBP14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 SLC39A2Q9NP94 309 aa14.83□□□□□ -0.04
CCDC88C-201ENST00000331194 H0YGN5 161 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 CLTAP09496 248 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 MAGOHP61326 146 aaKnown RBP14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 ELF3P78545 371 aaPredicted RBP14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 CPLX4Q7Z7G2 160 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 RUBCNQ92622 972 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 MAGOHBQ96A72 148 aaKnown RBP14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 AP1M1Q9BXS5 423 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 PACSIN1Q9BY11 444 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 KANSL2Q9H9L4 492 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 NOD2Q9HC29 1040 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 SH3BP1Q9Y3L3 701 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 NFS1Q9Y697 457 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 RHOBTB3O94955 611 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 IL2RBP14784 551 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 ECHS1P30084 290 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 TROAPQ12815 778 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 CATIPQ7Z7H3 387 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 PNMA8AQ86V59 439 aaPredicted RBP14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 NSMCE1Q8WV22 266 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 ACSBG1Q96GR2 724 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 ERGIC2Q96RQ1 377 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 ZSCAN10Q96SZ4 725 aaPredicted RBP14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 SEMA6BQ9H3T3 888 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 GGT7Q9UJ14 662 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 ASAP1Q9ULH1 1129 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 SIK3Q9Y2K2 1263 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 ADAMTS7Q9UKP4 1686 aa14.82□□□□□ -0.04
CCDC88C-201ENST00000331194 UPP2O95045 317 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 ATP6V1G2O95670 118 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 CCNE1P24864 410 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 KLRC1P26715 233 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 UBA7P41226 1012 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 CDK17Q00537 523 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 SLC4A8Q2Y0W8 1093 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 FAM182BQ5T319 152 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 MREGQ8N565 214 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 XIRP1Q702N8 1843 aaKnown RBP14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 A0A1B0GUA9 196 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 F8W031 263 aaPredicted RBP14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 HSPA9P38646 679 aaKnown RBP14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 CCT6BQ92526 530 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 ARID4AP29374 1257 aaPredicted RBP14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 BCAMP50895 628 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 KCNQ4P56696 695 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 ASIC1P78348 528 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 DRP2Q13474 957 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 NDST4Q9H3R1 872 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 FBXL5Q9UKA1 691 aa14.81□□□□□ -0.04
CCDC88C-201ENST00000331194 MGRN1O60291 552 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 XRCC4Q13426 336 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 MSL1Q68DK7 614 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 TBC1D1Q86TI0 1168 aaPredicted RBP14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 ESR2Q92731 530 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 KIF9Q9HAQ2 790 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 ATP6V0A4Q9HBG4 840 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 GGA2Q9UJY4 613 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 MTMR7Q9Y216 660 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 BUB1BO60566 1050 aaPredicted RBP14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 PLCG1P19174 1290 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 LONP1P36776 959 aaKnown RBP14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 KCNB1Q14721 858 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 VWA3BQ502W6 1294 aa14.8□□□□□ -0.04
CCDC88C-201ENST00000331194 FAM47AQ5JRC9 791 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms