RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 USP28Q96RU2 1077 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 BRD1O95696 1058 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
PTPN21-201ENST00000328736 CHRNDQ07001 517 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 WHAMMQ8TF30 809 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 PPP2R2CQ9Y2T4 447 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 SPECC1L-ADORA2AF8WAN1 911 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 TTI1O43156 1089 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 THEGQ9P2T0 379 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 HSPD1P10809 573 aaKnown RBP16.76■□□□□ 0.27
PTPN21-201ENST00000328736 ANXA13P27216 316 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 CCDC124Q96CT7 223 aaKnown RBP16.76■□□□□ 0.27
PTPN21-201ENST00000328736 XDHP47989 1333 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 CPP00450 1065 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 THOC5Q13769 683 aaKnown RBP16.76■□□□□ 0.27
PTPN21-201ENST00000328736 PDCD2Q16342 344 aaPredicted RBP16.76■□□□□ 0.27
PTPN21-201ENST00000328736 CDHR1Q96JP9 859 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 KMT5AQ9NQR1 393 aa16.76■□□□□ 0.27
PTPN21-201ENST00000328736 GNGT2O14610 69 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ARL4AP40617 200 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 GOLGA8FQ08AF8 430 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 GOLGA8DPQ0D2H9 430 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 KIAA1841Q6NSI8 718 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 CAPS2Q9BXY5 557 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 M0R2C6 588 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 RBM6P78332 1123 aaKnown RBP16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 MCUQ8NE86 351 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 A0A087WWV3 80 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 hCG_1984214I3L0E3 225 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 GSTA4O15217 222 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 NVLO15381 856 aaKnown RBP16.75■□□□□ 0.27
PTPN21-201ENST00000328736 NFKBIAP25963 317 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ZNF713Q8N859 430 aaPredicted RBP16.75■□□□□ 0.27
PTPN21-201ENST00000328736 TACO1Q9BSH4 297 aaKnown RBP16.75■□□□□ 0.27
PTPN21-201ENST00000328736 WDR11Q9BZH6 1224 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 LEMD3Q9Y2U8 911 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ZNF804BA4D1E1 1349 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ACTN1P12814 892 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 ADGRL2O95490 1459 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 MCF2LO15068 1137 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 SYMPKQ92797 1274 aaKnown RBP16.75■□□□□ 0.27
PTPN21-201ENST00000328736 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
PTPN21-201ENST00000328736 PLEKHG3A1L390 1219 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 GREM2Q9H772 168 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 KIAA1024Q9UPX6 916 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 KDM6BO15054 1643 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 AK8Q96MA6 479 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 WDR64B1ANS9 1081 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 MAPK4P31152 587 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 SLC8A1P32418 973 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 ADAT2Q7Z6V5 191 aaKnown RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 MYLK4Q86YV6 388 aaPredicted RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 TAB3Q8N5C8 712 aaPredicted RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 ADCY9O60503 1353 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 TRAPPC10P48553 1259 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 SCRN1Q12765 414 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 DCLK2Q8N568 766 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 GJA10Q969M2 543 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 CNOT6LQ96LI5 555 aaKnown RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 DRC3Q9H069 523 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 LUC7L3O95232 432 aaKnown RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 TTLL1O95922 423 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 AFPP02771 609 aaKnown RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 KSR1Q8IVT5 923 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 SRRM1Q8IYB3 904 aaKnown RBP16.74■□□□□ 0.27
PTPN21-201ENST00000328736 CCHCR1Q8TD31 782 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 SLAIN2Q9P270 581 aa16.74■□□□□ 0.27
PTPN21-201ENST00000328736 EFCAB8A8MWE9 144 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 MYO1EQ12965 1108 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 MESDQ14696 234 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPN21-201ENST00000328736 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 EEF2KMTQ96G04 330 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 KCNQ4P56696 695 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 RIPOR2Q9Y4F9 1068 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 POC1B-GALNT4F8VUJ3 575 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 ATP6V1E1P36543 226 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 SURF1Q15526 300 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 ARHGEF18Q6ZSZ5 1173 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 LRRC43Q8N309 656 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 FAM149B1Q96BN6 582 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 CAPN7Q9Y6W3 813 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 INO80B-WBP1J3KQ70 363 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 SUN1O94901 812 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 GCFC2P16383 781 aaKnown RBP16.73■□□□□ 0.27
PTPN21-201ENST00000328736 PPARGP37231 505 aaPredicted RBP16.73■□□□□ 0.27
PTPN21-201ENST00000328736 NDUFA8P51970 172 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 COPB1P53618 953 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms