RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 TBX3O15119 743 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 LCA5LO95447 670 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 EEF2P13639 858 aaKnown RBP13.4□□□□□ -0.26
NCL-201ENST00000322723 AMPD3Q01432 767 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 CAMKK2Q96RR4 588 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 ST7Q9NRC1 585 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
NCL-201ENST00000322723 DNM2P50570 870 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 SHROOM1Q2M3G4 852 aaPredicted RBP13.4□□□□□ -0.26
NCL-201ENST00000322723 MTMR14Q8NCE2 650 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 SIK3Q9Y2K2 1263 aa13.4□□□□□ -0.26
NCL-201ENST00000322723 PLA2G6O60733 806 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 CYP3A4P08684 503 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 TUBB2AQ13885 445 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 LARP4BQ92615 738 aaKnown RBP13.39□□□□□ -0.27
NCL-201ENST00000322723 TUBB2BQ9BVA1 445 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 VPS33BQ9H267 617 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 A0A0U1RQJ8 604 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 AMPD2Q01433 879 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 FBXO38Q6PIJ6 1188 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 CYP26C1Q6V0L0 522 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 ATRIPQ8WXE1 791 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 APBA3O96018 575 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 FCER1AP12319 257 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 KCTD17Q8N5Z5 321 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 CNKSR1Q969H4 720 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 DBNDD1Q9H9R9 158 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
NCL-201ENST00000322723 H0YHG0 523 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 CCT6AP40227 531 aaKnown RBP13.38□□□□□ -0.27
NCL-201ENST00000322723 MRPL12P52815 198 aaKnown RBP13.38□□□□□ -0.27
NCL-201ENST00000322723 SETQ01105 290 aaPredicted RBP13.38□□□□□ -0.27
NCL-201ENST00000322723 PSMD1Q99460 953 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 N4BP3O15049 544 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 NKRFO15226 690 aaKnown RBP eCLIP13.38□□□□□ -0.27
NCL-201ENST00000322723 COBLO75128 1261 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 HNRNPH2P55795 449 aaKnown RBP13.38□□□□□ -0.27
NCL-201ENST00000322723 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 STIM1Q13586 685 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 TERF2Q15554 542 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 CALML4Q96GE6 196 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 KDM3AQ9Y4C1 1321 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 SLURP2P0DP57 97 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 SREBF1P36956 1147 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 UBE2SQ16763 222 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 SV2BQ7L1I2 683 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
NCL-201ENST00000322723 NUP58Q9BVL2 599 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 LRRC27Q9C0I9 530 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 DDX25Q9UHL0 483 aaKnown RBP13.38□□□□□ -0.27
NCL-201ENST00000322723 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
NCL-201ENST00000322723 F8W031 263 aaPredicted RBP13.37□□□□□ -0.27
NCL-201ENST00000322723 GHRHRQ02643 423 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 PDE4DQ08499 809 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 VPS16Q9H269 839 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 EXOC1Q9NV70 894 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 ARID2Q68CP9 1835 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 H0YIN7 160 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 TBC1D12O60347 775 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 CERKLQ49MI3 558 aaPredicted RBP13.37□□□□□ -0.27
NCL-201ENST00000322723 FKBP1CQ5VVH2 108 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 FAM114A1Q8IWE2 563 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 CCDC102AQ96A19 550 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 DESI2Q9BSY9 194 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 MCM6Q14566 821 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
NCL-201ENST00000322723 TMEM266Q2M3C6 531 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 DPY19L2P1Q6NXN4 242 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 SUPT20HQ8NEM7 779 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 PSTPIP2Q9H939 334 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 VAT1LQ9HCJ6 419 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 PITPNM2Q9BZ72 1349 aa13.37□□□□□ -0.27
NCL-201ENST00000322723 POTEMA6NI47 508 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 HERVK_113P62684 666 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
NCL-201ENST00000322723 RAB34Q9BZG1 259 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
NCL-201ENST00000322723 KCNA3P22001 575 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 TXKP42681 527 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 EPM2AIP1Q7L775 607 aaPredicted RBP13.36□□□□□ -0.27
NCL-201ENST00000322723 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 HERC5Q9UII4 1024 aaKnown RBP13.36□□□□□ -0.27
NCL-201ENST00000322723 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 ANO3Q9BYT9 981 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
NCL-201ENST00000322723 UBXN1Q04323 297 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 OR8K1Q8NGG5 319 aa13.36□□□□□ -0.27
NCL-201ENST00000322723 KCTD10Q9H3F6 313 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms