RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 COBLL1Q53SF7 1204 aa19.02■□□□□ 0.64
SSR4-201ENST00000320857 CCDC174Q6PII3 467 aa19.02■□□□□ 0.64
SSR4-201ENST00000320857 UNC13DQ70J99 1090 aa19.02■□□□□ 0.64
SSR4-201ENST00000320857 PRIMPOLQ96LW4 560 aa19.02■□□□□ 0.64
SSR4-201ENST00000320857 P2RX7Q99572 595 aaKnown RBP19.02■□□□□ 0.64
SSR4-201ENST00000320857 GPRC5DQ9NZD1 345 aa19.02■□□□□ 0.64
SSR4-201ENST00000320857 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.02■□□□□ 0.64
SSR4-201ENST00000320857 MAPK8IP1Q9UQF2 711 aa19.02■□□□□ 0.64
SSR4-201ENST00000320857 ABCB11O95342 1321 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 BICDL2A1A5D9 508 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 GCOM1H8Y6P7 765 aaPredicted RBP19.01■□□□□ 0.63
SSR4-201ENST00000320857 POLR2MP0CAP2 368 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 PRR16Q569H4 304 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 APOBEC3FQ8IUX4 373 aaKnown RBP19.01■□□□□ 0.63
SSR4-201ENST00000320857 FAM20AQ96MK3 541 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 NUDT12Q9BQG2 462 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 ZNF341Q9BYN7 854 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 THAP9Q9H5L6 903 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 EHMT1Q9H9B1 1298 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 MYMKA6NI61 221 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 LRRC10BA6NIK2 292 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 KCNJ18B7U540 433 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 CTNND1O60716 968 aaKnown RBP19.01■□□□□ 0.63
SSR4-201ENST00000320857 HOXA13P31271 388 aaPredicted RBP19.01■□□□□ 0.63
SSR4-201ENST00000320857 ZNF76P36508 570 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 KCNJ12Q14500 433 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 KRT31Q15323 416 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
SSR4-201ENST00000320857 ERMNQ8TAM6 284 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 ETNPPLQ8TBG4 499 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 ZNF526Q8TF50 670 aaPredicted RBP19.01■□□□□ 0.63
SSR4-201ENST00000320857 LPAR1Q92633 364 aa19.01■□□□□ 0.63
SSR4-201ENST00000320857 GLIS2Q9BZE0 524 aaPredicted RBP19.01■□□□□ 0.63
SSR4-201ENST00000320857 WDR46O15213 610 aaKnown RBP19■□□□□ 0.63
SSR4-201ENST00000320857 CCP110O43303 1012 aa19■□□□□ 0.63
SSR4-201ENST00000320857 TAL1P17542 331 aaPredicted RBP19■□□□□ 0.63
SSR4-201ENST00000320857 CCNE1P24864 410 aa19■□□□□ 0.63
SSR4-201ENST00000320857 TCP11X2Q5H9J9 407 aa19■□□□□ 0.63
SSR4-201ENST00000320857 HAUS3Q68CZ6 603 aa19■□□□□ 0.63
SSR4-201ENST00000320857 DPY19L2Q6NUT2 758 aa19■□□□□ 0.63
SSR4-201ENST00000320857 TRIM47Q96LD4 638 aa19■□□□□ 0.63
SSR4-201ENST00000320857 TMX1Q9H3N1 280 aa19■□□□□ 0.63
SSR4-201ENST00000320857 TEX33O43247 280 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 COBLO75128 1261 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 COPB1P53618 953 aaKnown RBP18.99■□□□□ 0.63
SSR4-201ENST00000320857 NBPF12Q5TAG4 269 aaPredicted RBP18.99■□□□□ 0.63
SSR4-201ENST00000320857 ANGEL2Q5VTE6 544 aaKnown RBP18.99■□□□□ 0.63
SSR4-201ENST00000320857 DCAF15Q66K64 600 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 FCHSD1Q86WN1 690 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 TRPM4Q8TD43 1214 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 P2RX5Q93086 422 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 GJA10Q969M2 543 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 HOOK2Q96ED9 719 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 BMP2KQ9NSY1 1161 aaPredicted RBP18.99■□□□□ 0.63
SSR4-201ENST00000320857 MAGEC2Q9UBF1 373 aaPredicted RBP18.99■□□□□ 0.63
SSR4-201ENST00000320857 ITIH6Q6UXX5 1313 aa18.99■□□□□ 0.63
SSR4-201ENST00000320857 N4BP3O15049 544 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 CFBP00751 764 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 TNNT1P13805 278 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 EEF1GP26641 437 aaKnown RBP18.98■□□□□ 0.63
SSR4-201ENST00000320857 PBX1P40424 430 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 STK4Q13043 487 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 PSMD2Q13200 908 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 PTPN21Q16825 1174 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 TTI2Q6NXR4 508 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 PPFIBP1Q86W92 1011 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 LENG9Q96B70 501 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 C16orf45Q96MC5 204 aaPredicted RBP18.98■□□□□ 0.63
SSR4-201ENST00000320857 KIAA1683Q9H0B3 1180 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 TRIM49BA6NDI0 452 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 FAM86B1E9PN63 330 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 FAM86B2P0C5J1 330 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 ECM1Q16610 540 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 KCNK18Q7Z418 384 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 CCDC84Q86UT8 332 aaPredicted RBP18.98■□□□□ 0.63
SSR4-201ENST00000320857 LDHDQ86WU2 507 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 FAM114A1Q8IWE2 563 aa18.98■□□□□ 0.63
SSR4-201ENST00000320857 AKR1B15C9JRZ8 316 aaPredicted RBP18.97■□□□□ 0.63
SSR4-201ENST00000320857 TPM1P09493 284 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 FCER1AP12319 257 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 PMS1P54277 932 aaKnown RBP18.97■□□□□ 0.63
SSR4-201ENST00000320857 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
SSR4-201ENST00000320857 DYMQ7RTS9 669 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 PRPF38AQ8NAV1 312 aaKnown RBP18.97■□□□□ 0.63
SSR4-201ENST00000320857 DDX12PQ92771 950 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 SLF1Q9BQI6 1058 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 SRRTQ9BXP5 876 aaKnown RBP18.97■□□□□ 0.63
SSR4-201ENST00000320857 FBXO28Q9NVF7 368 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 TAB2Q9NYJ8 693 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 ZNF112Q9UJU3 913 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 KIAA1024Q9UPX6 916 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.97■□□□□ 0.63
SSR4-201ENST00000320857 PPP2R3BQ9Y5P8 575 aa18.97■□□□□ 0.63
SSR4-201ENST00000320857 GLTPD2A6NH11 291 aa18.96■□□□□ 0.63
SSR4-201ENST00000320857 KIF2AO00139 706 aaPredicted RBP18.96■□□□□ 0.63
SSR4-201ENST00000320857 ARHGAP6O43182 974 aa18.96■□□□□ 0.63
SSR4-201ENST00000320857 ICAM1P05362 532 aa18.96■□□□□ 0.63
SSR4-201ENST00000320857 PTPN14Q15678 1187 aa18.96■□□□□ 0.63
SSR4-201ENST00000320857 E4F1Q66K89 784 aaPredicted RBP18.96■□□□□ 0.63
SSR4-201ENST00000320857 CSGALNACT2Q8N6G5 542 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms