RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 CNGA4Q8IV77 575 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 FAM71BQ8TC56 605 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 TNFRSF25Q93038 417 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 COA7Q96BR5 231 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 EFCC1Q9HA90 598 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 MYO1AQ9UBC5 1043 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 USP17L10C9JJH3 530 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 RNF225M0QZC1 329 aaPredicted RBP17.78■□□□□ 0.44
USH1C-202ENST00000318024 EIF3JO75822 258 aaKnown RBP17.78■□□□□ 0.44
USH1C-202ENST00000318024 TUBBP07437 444 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 ANGEL2Q5VTE6 544 aaKnown RBP17.78■□□□□ 0.44
USH1C-202ENST00000318024 BLIDQ8IZY5 108 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 NOA1Q8NC60 698 aaKnown RBP17.78■□□□□ 0.44
USH1C-202ENST00000318024 CPLX3Q8WVH0 158 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 NAPGQ99747 312 aaPredicted RBP17.78■□□□□ 0.44
USH1C-202ENST00000318024 GPRC5DQ9NZD1 345 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 RSPH14Q9UHP6 348 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 ZBTB21Q9ULJ3 1066 aa17.78■□□□□ 0.44
USH1C-202ENST00000318024 LRRIQ3A6PVS8 624 aaPredicted RBP17.77■□□□□ 0.44
USH1C-202ENST00000318024 TNFAIP1Q13829 316 aa17.77■□□□□ 0.44
USH1C-202ENST00000318024 ZYXQ15942 572 aaKnown RBP17.77■□□□□ 0.44
USH1C-202ENST00000318024 GPC2Q8N158 579 aa17.77■□□□□ 0.44
USH1C-202ENST00000318024 PAGE5Q96GU1 130 aa17.77■□□□□ 0.44
USH1C-202ENST00000318024 SH3GLB2Q9NR46 395 aa17.77■□□□□ 0.44
USH1C-202ENST00000318024 PCDHA4Q9UN74 947 aa17.77■□□□□ 0.44
USH1C-202ENST00000318024 FZD1Q9UP38 647 aa17.77■□□□□ 0.44
USH1C-202ENST00000318024 ZC3H4Q9UPT8 1303 aaKnown RBP17.77■□□□□ 0.43
USH1C-202ENST00000318024 NDUFB10O96000 172 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 STX17P56962 302 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 SNAP25P60880 206 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 GPATCH4Q5T3I0 446 aaKnown RBP17.76■□□□□ 0.43
USH1C-202ENST00000318024 TMTC1Q8IUR5 882 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 LIMA1Q9UHB6 759 aaKnown RBP17.76■□□□□ 0.43
USH1C-202ENST00000318024 CTAGE15A4D2H0 777 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 SMCO2A6NFE2 343 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 TBC1D12O60347 775 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 RHOXF2BP0C7M4 288 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 CTAGE8P0CG41 777 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 CALML3P27482 149 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 SMARCA1P28370 1054 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 CAP2P40123 477 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 AARSP49588 968 aaKnown RBP eCLIP17.76■□□□□ 0.43
USH1C-202ENST00000318024 HIRAP54198 1017 aaPredicted RBP17.76■□□□□ 0.43
USH1C-202ENST00000318024 ZNF174Q15697 407 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 NBPF12Q5TAG4 269 aaPredicted RBP17.76■□□□□ 0.43
USH1C-202ENST00000318024 LEKR1Q6ZMV7 388 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 CTAGE6Q86UF2 777 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 CTAGE4Q8IX94 777 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 GSDMAQ96QA5 445 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 RHOXF2Q9BQY4 288 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 GLIS2Q9BZE0 524 aaPredicted RBP17.76■□□□□ 0.43
USH1C-202ENST00000318024 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 CEP131Q9UPN4 1083 aa17.76■□□□□ 0.43
USH1C-202ENST00000318024 CASP1P29466 404 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 MMP14P50281 582 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 KIAA1755Q5JYT7 1200 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 LRRC31Q6UY01 552 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 EPSTI1Q96J88 318 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 ABHD10Q9NUJ1 306 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 GREB1LQ9C091 1923 aaPredicted RBP17.75■□□□□ 0.43
USH1C-202ENST00000318024 PPP1R11O60927 126 aaPredicted RBP17.75■□□□□ 0.43
USH1C-202ENST00000318024 PRPF6O94906 941 aaKnown RBP17.75■□□□□ 0.43
USH1C-202ENST00000318024 IKQ13123 557 aaPredicted RBP17.75■□□□□ 0.43
USH1C-202ENST00000318024 CCDC148Q8NFR7 591 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 VIPAS39Q9H9C1 493 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 MED4Q9NPJ6 270 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 PCDHA6Q9UN73 950 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 REXO2Q9Y3B8 237 aaKnown RBP17.75■□□□□ 0.43
USH1C-202ENST00000318024 PCDHA8Q9Y5H6 950 aa17.75■□□□□ 0.43
USH1C-202ENST00000318024 C9orf131Q5VYM1 1079 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 KLHL10Q6JEL2 608 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 DCAF4Q8WV16 495 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 MYH4Q9Y623 1939 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 TRIM75PA6NK02 468 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 SYF2O95926 243 aaKnown RBP17.74■□□□□ 0.43
USH1C-202ENST00000318024 KRT31Q15323 416 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 DLK2Q6UY11 383 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 TRAPPC11Q7Z392 1133 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 SMYD4Q8IYR2 804 aaPredicted RBP17.74■□□□□ 0.43
USH1C-202ENST00000318024 ZMYND12Q9H0C1 365 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 GGA3Q9NZ52 723 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 MYO6Q9UM54 1294 aa17.74■□□□□ 0.43
USH1C-202ENST00000318024 PNMA6FA0A0J9YX94 578 aa17.73■□□□□ 0.43
USH1C-202ENST00000318024 MAPK8IP2Q13387 824 aaPredicted RBP17.73■□□□□ 0.43
USH1C-202ENST00000318024 FILIP1LQ4L180 1135 aa17.73■□□□□ 0.43
USH1C-202ENST00000318024 GMCL1P1Q8NEA9 526 aa17.73■□□□□ 0.43
USH1C-202ENST00000318024 ARHGEF10LQ9HCE6 1279 aa17.73■□□□□ 0.43
USH1C-202ENST00000318024 CCDC194A0A1B0GVG4 234 aa17.72■□□□□ 0.43
USH1C-202ENST00000318024 M0R2N6 131 aa17.72■□□□□ 0.43
USH1C-202ENST00000318024 CDC25AP30304 524 aa17.72■□□□□ 0.43
USH1C-202ENST00000318024 MCM7P33993 719 aa17.72■□□□□ 0.43
USH1C-202ENST00000318024 AFMP43652 599 aa17.72■□□□□ 0.43
USH1C-202ENST00000318024 MAP3K10Q02779 954 aa17.72■□□□□ 0.43
USH1C-202ENST00000318024 TTC38Q5R3I4 469 aa17.72■□□□□ 0.43
USH1C-202ENST00000318024 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
USH1C-202ENST00000318024 BIN2Q9UBW5 565 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms