RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SV2BQ7L1I2 683 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ARMC2Q8NEN0 867 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 DUSP9Q99956 384 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 FAM207AQ9NSI2 230 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 MAPK8IP1Q9UQF2 711 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 RCCD1A6NED2 376 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ZNF185O15231 689 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 GLI1P08151 1106 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 PDE6CP51160 858 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ZC3H6P61129 1189 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 NAA25Q14CX7 972 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 NAB2Q15742 525 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 NPY5RQ15761 445 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 KIAA0753Q2KHM9 967 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 TMEM266Q2M3C6 531 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 HIBCHQ6NVY1 386 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 CUL5Q93034 780 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 HVCN1Q96D96 273 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 SCLT1Q96NL6 688 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 MTRQ99707 1265 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 MLXIPQ9HAP2 919 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 TRMT112Q9UI30 125 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 PCDHA4Q9UN74 947 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ATP6V0A2Q9Y487 856 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 TRIM49BA6NDI0 452 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 MINDY4BA8MYZ0 360 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 hCG_1984214I3L0E3 225 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 MOCS3O95396 460 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 A1BGP04217 495 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 BRD2P25440 801 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 NONOQ15233 471 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 SLC18A3Q16572 532 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 BTNL9Q6UXG8 535 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ZNF713Q8N859 430 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 VGLL2Q8N8G2 317 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ENAHQ8N8S7 591 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ACTRT1Q8TDG2 376 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 RRP36Q96EU6 259 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 XPO6Q96QU8 1125 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 SIK3Q9Y2K2 1263 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 CCT8L1PA6NM43 557 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 IRS4O14654 1257 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 GFPT2O94808 682 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 CTSWP56202 376 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 SARNPP82979 210 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 RASGRF1Q13972 1273 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ITIH4Q14624 930 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ASTE1Q2TB18 679 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ANKRD20A8PQ5CZ79 823 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ANKS1AQ92625 1134 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 DENND2AQ9ULE3 1009 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 LEMD3Q9Y2U8 911 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 LRRC53A6NM62 1247 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 CYP7A1P22680 504 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 NAALADL2Q58DX5 795 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 KLHDC7AQ5VTJ3 777 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 UNC13DQ70J99 1090 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 STAG2Q8N3U4 1231 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 SEC16BQ96JE7 1060 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 SPAG5Q96R06 1193 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 KRT12Q99456 494 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 RABEP2Q9H5N1 569 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 DDX20Q9UHI6 824 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 TPX2Q9ULW0 747 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 PIK3C2AO00443 1686 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 UBE2Q2LH0YL09 131 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 LIN7AO14910 233 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 OR52Z1P0C646 297 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 IGHMBP2P38935 993 aaKnown RBP5.25□□□□□ -1.57
PTPN13-201ENST00000316707 SCTRP47872 440 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 PPP1R7Q15435 360 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 TBC1D31Q96DN5 1066 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 CDK5RAP3Q96JB5 506 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 RUNDC3BQ96NL0 473 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 CARD10Q9BWT7 1032 aa5.25□□□□□ -1.57
PTPN13-201ENST00000316707 ZNF263O14978 683 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 PDE6BP35913 854 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 USP11P51784 963 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 KLHL30Q0D2K2 578 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 FAM83BQ5T0W9 1011 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 MEI1Q5TIA1 1274 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 TTC19Q6DKK2 380 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-201ENST00000316707 CABP7Q86V35 215 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 LCORLQ8N3X6 602 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 ZCRB1Q8TBF4 217 aaKnown RBP5.24□□□□□ -1.57
PTPN13-201ENST00000316707 SAAL1Q96ER3 474 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 FAM129AQ9BZQ8 928 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 BCCIPQ9P287 314 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPN13-201ENST00000316707 BAIAP2L1Q9UHR4 511 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 MAGEB6P1A0A0J9YX57 407 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 ASAP2O43150 1006 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 CCND1P24385 295 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 GUCY2FP51841 1108 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 NPEPPSP55786 919 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 RASSF7Q02833 373 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 ZNF268Q14587 947 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-201ENST00000316707 PSMD1Q99460 953 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 ZKSCAN3Q9BRR0 538 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 TANGO6Q9C0B7 1094 aa5.24□□□□□ -1.57
PTPN13-201ENST00000316707 TAOK3Q9H2K8 898 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms