RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SPDYE2BA6NHP3 402 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 LRRC10BA6NIK2 292 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 SPDYE6P0CI01 402 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 NOVP48745 357 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 TCP11X2Q5H9J9 407 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 KCTD1Q719H9 257 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 VEZTQ9HBM0 779 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 GNAQP50148 359 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 SPAG1Q07617 926 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 PAK1Q13153 545 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 SEPT2Q15019 361 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 TADA2BQ86TJ2 420 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 OGFOD1Q8N543 542 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 CSRNP1Q96S65 589 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 HAUS4Q9H6D7 363 aa19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 ZNF646O15015 1829 aaPredicted RBP19.13■□□□□ 0.65
SCAMP4-201ENST00000316097 MYBL2P10244 700 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 DLGAP5Q15398 846 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 CCDC122Q5T0U0 273 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 MICALL1Q8N3F8 863 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 DHX36Q9H2U1 1008 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 YY1AP1Q9H869 796 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 BRMS1Q9HCU9 246 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 RWDD2AQ9UIY3 292 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 MAPK8IP1Q9UQF2 711 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 GUCY2CP25092 1073 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 RBM26Q5T8P6 1007 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 NELFBQ8WX92 580 aa19.12■□□□□ 0.65
SCAMP4-201ENST00000316097 TTC26A0AVF1 554 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 STXBP3O00186 592 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 NFKBIEO00221 500 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 EEF2P13639 858 aaKnown RBP19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 NT5C2P49902 561 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 HERVK_113P62684 666 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 BLIDQ8IZY5 108 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 CAGE1Q8TC20 777 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 FERMT2Q96AC1 680 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 SELENOOQ9BVL4 669 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 PES1O00541 588 aaKnown RBP19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 EGFRP00533 1210 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 MCM7P33993 719 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 NBPF9Q3BBW0 867 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 NLGN2Q8NFZ4 835 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 FAM76AQ8TAV0 307 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 EHD4Q9H223 541 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 TAOK3Q9H2K8 898 aa19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.11■□□□□ 0.65
SCAMP4-201ENST00000316097 A0A087WUV0 522 aaPredicted RBP19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 TARSL2A2RTX5 802 aaKnown RBP19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 AGPSO00116 658 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 CPP00450 1065 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 RASSF7Q02833 373 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 SIAH1Q8IUQ4 282 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 OR8K1Q8NGG5 319 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 JAKMIP2Q96AA8 810 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 COA7Q96BR5 231 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 BARHL2Q9NY43 387 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 ZNF70Q9UC06 446 aaPredicted RBP19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 CCT5P48643 541 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 CKAP4Q07065 602 aaKnown RBP19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 PAPD7Q5XG87 772 aaKnown RBP19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 MIGA2Q7L4E1 593 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 HINFPQ9BQA5 517 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 TMEM39BQ9GZU3 492 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 DEF6Q9H4E7 631 aa19.1■□□□□ 0.65
SCAMP4-201ENST00000316097 NAPAP54920 295 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 TTC38Q5R3I4 469 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 KIAA1328Q86T90 577 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 RRP36Q96EU6 259 aaKnown RBP19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 SPZ1Q9BXG8 430 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 PCDHA4Q9UN74 947 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 LUC7L2Q9Y383 392 aaKnown RBP19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 PLIN4Q96Q06 1357 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 GOLGA6CA6NDK9 693 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 ZNF185O15231 689 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 GOLGA6DP0CG33 693 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 PRELPP51888 382 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 PTGDRQ13258 359 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 CCDC96Q2M329 555 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 GRIPAP1Q4V328 841 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 RABEP2Q9H5N1 569 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 GOLGA6AQ9NYA3 693 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 PCDHA6Q9UN73 950 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 PCDHA8Q9Y5H6 950 aa19.09■□□□□ 0.65
SCAMP4-201ENST00000316097 SHOX2O60902 331 aaPredicted RBP19.08■□□□□ 0.65
SCAMP4-201ENST00000316097 JDP2Q8WYK2 163 aa19.08■□□□□ 0.65
SCAMP4-201ENST00000316097 RPGRIP1Q96KN7 1286 aa19.08■□□□□ 0.65
SCAMP4-201ENST00000316097 MTRQ99707 1265 aa19.08■□□□□ 0.65
SCAMP4-201ENST00000316097 SGIP1Q9BQI5 828 aa19.08■□□□□ 0.65
SCAMP4-201ENST00000316097 GDAQ9Y2T3 454 aa19.08■□□□□ 0.65
SCAMP4-201ENST00000316097 GOLGA6BA6NDN3 693 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 GH2P01242 217 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 E2F4Q16254 413 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 TSR1Q2NL82 804 aaKnown RBP19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 TATDN1Q6P1N9 297 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 CCNI2Q6ZMN8 369 aaPredicted RBP19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 HDAC9Q9UKV0 1011 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 SMCO2A6NFE2 343 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 PDE2AO00408 941 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms