RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 TBC1D12O60347 775 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 MAP3K10Q02779 954 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 FKBP1CQ5VVH2 108 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 LRRC8AQ8IWT6 810 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 NELFBQ8WX92 580 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 VPS16Q9H269 839 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 GTPBP6O43824 516 aaPredicted RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 TXLNAP40222 546 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 PABPC4Q13310 644 aaKnown RBP eCLIP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 CTTNQ14247 550 aaKnown RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 IRF2BP1Q8IU81 584 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 BPIFA3Q9BQP9 254 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 CCSER1Q9C0I3 900 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 RANBP17Q9H2T7 1088 aaKnown RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 KCNMB3Q9NPA1 279 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 TAB2Q9NYJ8 693 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 ARFGEF1Q9Y6D6 1849 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 RSPH10B2B2RC85 870 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 RSPH10BP0C881 870 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 EIF2AK2P19525 551 aaKnown RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 PDE4DQ08499 809 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 MKRN3Q13064 507 aaKnown RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 TREML2Q5T2D2 321 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 CATSPER3Q86XQ3 398 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 KIAA1524Q8TCG1 905 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 MRFAP1L1Q96HT8 127 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 C16orf45Q96MC5 204 aaPredicted RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 WDR11Q9BZH6 1224 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 ZHX3Q9H4I2 956 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 IGLV3-22A0A075B6J6 115 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 PRPHP41219 470 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 KLK7P49862 253 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 NT5C2P49902 561 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 CCZ1BP86790 482 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 CCZ1P86791 482 aaPredicted RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 NOLC1Q14978 699 aaKnown RBP eCLIP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 PPP4R3AQ6IN85 833 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 NSMFQ6X4W1 530 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 CLEC4DQ8WXI8 215 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 GSDMAQ96QA5 445 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 VPS33BQ9H267 617 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 TMX1Q9H3N1 280 aa7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 R3HCC1Q9Y3T6 440 aaKnown RBP7.86□□□□□ -1.15
LYSMD3-201ENST00000315948 FAM170AA1A519 330 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 IKBKBO14920 756 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 ITGB5P18084 799 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 RPS12P25398 132 aaKnown RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 ZNF76P36508 570 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 VGLL4Q14135 290 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 KSR1Q8IVT5 923 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 GPC2Q8N158 579 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 MLKLQ8NB16 471 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 DDX12PQ92771 950 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 KLRG1Q96E93 195 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 SPATA31C1P0DKV0 1188 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 SKILP12757 684 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 CASP5P51878 434 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 SP4Q02446 784 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 TNFAIP1Q13829 316 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 PLS1Q14651 629 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 EAPPQ56P03 285 aaPredicted RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 MAEAQ7L5Y9 396 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 CCDC155Q8N6L0 562 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 LARP4BQ92615 738 aaKnown RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 TAAR1Q96RJ0 339 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 LTBP3Q9NS15 1303 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 CTNND1O60716 968 aaKnown RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 USP2O75604 605 aaPredicted RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 SREBF1P36956 1147 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 FXR2P51116 673 aaKnown RBP eCLIP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 KCNA1Q09470 495 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 MTF1Q14872 753 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 CDK5RAP3Q96JB5 506 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 SLF1Q9BQI6 1058 aa7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 HOOK1Q9UJC3 728 aaKnown RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 COL2A1P02458 1487 aaPredicted RBP7.85□□□□□ -1.15
LYSMD3-201ENST00000315948 TRAF5O00463 557 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 PES1O00541 588 aaKnown RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 RPS6P62753 249 aaKnown RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 APBA1Q02410 837 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ARSHQ5FYA8 562 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ANKRD40Q6AI12 368 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 KANK3Q6NY19 840 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 PPP1R18Q6NYC8 613 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 NELFCDQ8IXH7 590 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 GCOM1H8Y6P7 765 aaPredicted RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 hCG_1984214I3L0E3 225 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 CAVIN2O95810 425 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 POLR2MP0CAP2 368 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 BACE1P56817 501 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 KRT31Q15323 416 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 HS1BP3Q53T59 392 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ZNF658Q5TYW1 1059 aaPredicted RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 KRT79Q5XKE5 535 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ZNF713Q8N859 430 aaPredicted RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 BANK1Q8NDB2 785 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 SEMA6BQ9H3T3 888 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms