RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 CDK17Q00537 523 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 ZNF543Q08ER8 600 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 CC2D1AQ6P1N0 951 aaPredicted RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 ZNF771Q7L3S4 317 aaPredicted RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 CTAGE6Q86UF2 777 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 CCDC84Q86UT8 332 aaPredicted RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 CTAGE4Q8IX94 777 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 MKL1Q969V6 931 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 PRMT6Q96LA8 375 aaPredicted RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 PLIN2Q99541 437 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 BIN2Q9UBW5 565 aaPredicted RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 PCDHAC2Q9Y5I4 1007 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 COBLO75128 1261 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 TXKP42681 527 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 MEA1Q16626 185 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 SLC35F6Q8N357 371 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 ACRBPQ8NEB7 543 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 GMLQ99445 158 aa16.62■□□□□ 0.25
CHFR-202ENST00000315585 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 IRX2Q9BZI1 471 aaPredicted RBP16.62■□□□□ 0.25
CHFR-202ENST00000315585 MCM3P25205 808 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 PMS1P54277 932 aaKnown RBP16.61■□□□□ 0.25
CHFR-202ENST00000315585 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
CHFR-202ENST00000315585 ATP2B2Q01814 1243 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 TXLNBQ8N3L3 684 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 JDP2Q8WYK2 163 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 LARP4BQ92615 738 aaKnown RBP16.61■□□□□ 0.25
CHFR-202ENST00000315585 ERGIC2Q96RQ1 377 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 SLF1Q9BQI6 1058 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 TSGA10Q9BZW7 698 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 RIC8AQ9NPQ8 531 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 LRRC63Q05C16 580 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 CENPPQ6IPU0 288 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 MTMR14Q8NCE2 650 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 CUL5Q93034 780 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 RPGRIP1Q96KN7 1286 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
CHFR-202ENST00000315585 PCMTD1Q96MG8 357 aaPredicted RBP16.61■□□□□ 0.25
CHFR-202ENST00000315585 DUSP9Q99956 384 aaKnown RBP16.61■□□□□ 0.25
CHFR-202ENST00000315585 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 TAOK3Q9H2K8 898 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 DNAJC18Q9H819 358 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
CHFR-202ENST00000315585 PRDM4Q9UKN5 801 aa16.61■□□□□ 0.25
CHFR-202ENST00000315585 FRMPD2Q68DX3 1309 aaPredicted RBP16.6■□□□□ 0.25
CHFR-202ENST00000315585 CCDC96Q2M329 555 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
CHFR-202ENST00000315585 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 MCTP2Q6DN12 878 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 SH3BP5LQ7L8J4 393 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 GUF1Q8N442 669 aaKnown RBP16.6■□□□□ 0.25
CHFR-202ENST00000315585 TSG101Q99816 390 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 SYNPO2Q9UMS6 1093 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
CHFR-202ENST00000315585 B4DLN1 442 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 STK4Q13043 487 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 ARHGAP27Q6ZUM4 889 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 KIAA1328Q86T90 577 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 CSRNP1Q96S65 589 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 MYO6Q9UM54 1294 aa16.6■□□□□ 0.25
CHFR-202ENST00000315585 MARCH6O60337 910 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 ARHGAP25P42331 645 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 MSL3Q8N5Y2 521 aaKnown RBP16.59■□□□□ 0.25
CHFR-202ENST00000315585 MMTAG2Q9BU76 263 aaKnown RBP16.59■□□□□ 0.25
CHFR-202ENST00000315585 GPCPD1Q9NPB8 672 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 ZNF70Q9UC06 446 aaPredicted RBP16.59■□□□□ 0.25
CHFR-202ENST00000315585 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 SIPA1L1O43166 1804 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 EIF3CLB5ME19 914 aaKnown RBP16.59■□□□□ 0.25
CHFR-202ENST00000315585 ICA1Q05084 483 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 TNIP1Q15025 636 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 EIF3CQ99613 913 aaKnown RBP16.59■□□□□ 0.25
CHFR-202ENST00000315585 CPVLQ9H3G5 476 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 RAB21Q9UL25 225 aa16.59■□□□□ 0.25
CHFR-202ENST00000315585 MYH4Q9Y623 1939 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 EEF2P13639 858 aaKnown RBP16.58■□□□□ 0.25
CHFR-202ENST00000315585 CKAP4Q07065 602 aaKnown RBP16.58■□□□□ 0.25
CHFR-202ENST00000315585 SPA17Q15506 151 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 CCDC122Q5T0U0 273 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 TAF3Q5VWG9 929 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 CIAPIN1Q6FI81 312 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 CHP1Q99653 195 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 GUCA1BQ9UMX6 200 aa16.58■□□□□ 0.25
CHFR-202ENST00000315585 RNF225M0QZC1 329 aaPredicted RBP16.58■□□□□ 0.24
CHFR-202ENST00000315585 USO1O60763 962 aaKnown RBP16.58■□□□□ 0.24
CHFR-202ENST00000315585 EIF3JO75822 258 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms