RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 GOLGA6CA6NDK9 693 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 GOLGA6BA6NDN3 693 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 GOLGA6DP0CG33 693 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 TTLL4Q14679 1199 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 SLC15A2Q16348 729 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 SYCE1Q8N0S2 351 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 GOLGA6AQ9NYA3 693 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 KIAA1468Q9P260 1216 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 PCDHA6Q9UN73 950 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 PCDHA8Q9Y5H6 950 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 ABCB11O95342 1321 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 GTPBP6O43824 516 aaPredicted RBP14.77□□□□□ -0.04
RFFL-201ENST00000315249 DDIT3P35638 169 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 MTMR2Q13614 643 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 CEP57Q86XR8 500 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 KLHL7Q8IXQ5 586 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 SLC17A8Q8NDX2 589 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 SKA2Q8WVK7 121 aaPredicted RBP14.77□□□□□ -0.04
RFFL-201ENST00000315249 CLUL1Q15846 466 aa14.77□□□□□ -0.05
RFFL-201ENST00000315249 ELMSAN1Q6PJG2 1045 aa14.77□□□□□ -0.05
RFFL-201ENST00000315249 ZNF668Q96K58 619 aaPredicted RBP14.77□□□□□ -0.05
RFFL-201ENST00000315249 TTC14Q96N46 770 aa14.77□□□□□ -0.05
RFFL-201ENST00000315249 NAPGQ99747 312 aaPredicted RBP14.77□□□□□ -0.05
RFFL-201ENST00000315249 IFIH1Q9BYX4 1025 aaKnown RBP14.77□□□□□ -0.05
RFFL-201ENST00000315249 PIK3C2BO00750 1634 aa14.77□□□□□ -0.05
RFFL-201ENST00000315249 NR2F2P24468 414 aa14.77□□□□□ -0.05
RFFL-201ENST00000315249 RIOK3O14730 519 aaKnown RBP14.77□□□□□ -0.05
RFFL-201ENST00000315249 ADKP55263 362 aaKnown RBP14.77□□□□□ -0.05
RFFL-201ENST00000315249 HUNKP57058 714 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 NOP9Q86U38 636 aaKnown RBP14.76□□□□□ -0.05
RFFL-201ENST00000315249 PIGOQ8TEQ8 1089 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 NUCKS1Q9H1E3 243 aaKnown RBP14.76□□□□□ -0.05
RFFL-201ENST00000315249 METTL14Q9HCE5 456 aaKnown RBP14.76□□□□□ -0.05
RFFL-201ENST00000315249 LAMC1P11047 1609 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 NBPF26B4DH59 902 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 POLR2BP30876 1174 aaKnown RBP14.76□□□□□ -0.05
RFFL-201ENST00000315249 NBPF10Q6P3W6 841 aaKnown RBP14.76□□□□□ -0.05
RFFL-201ENST00000315249 NBPF15Q8N660 670 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 ISCA1Q9BUE6 129 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 PLEKHA4Q9H4M7 779 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 RAB20Q9NX57 234 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 RNF8O76064 485 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 SLC12A2P55011 1212 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 PTK2Q05397 1052 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 RPS6KA1Q15418 735 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 EXOC3L4Q17RC7 722 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 FAM84BQ96KN1 310 aaPredicted RBP14.76□□□□□ -0.05
RFFL-201ENST00000315249 MIS12Q9H081 205 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 SFI1A8K8P3 1242 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 ANXA13P27216 316 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 PEX3P56589 373 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 MYO1EQ12965 1108 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 BARGINQ6ZT62 677 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 GIMAP8Q8ND71 665 aaPredicted RBP14.76□□□□□ -0.05
RFFL-201ENST00000315249 TECPR2O15040 1411 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 PSMD14O00487 310 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 KIF11P52732 1056 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 C8orf74Q6P047 294 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 CRAMP1Q96RY5 1269 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 PCDHA7Q9UN72 937 aa14.76□□□□□ -0.05
RFFL-201ENST00000315249 A6NJR5 290 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 F5H6K3 240 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 KLRC3Q07444 240 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 GAP43P17677 238 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 PPARDQ03181 441 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 SCARA5Q6ZMJ2 495 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 BANK1Q8NDB2 785 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 PARVGQ9HBI0 331 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 CDHR2Q9BYE9 1310 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 ABCA6Q8N139 1617 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 FER1L4A9Z1Z3 1794 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 TSTA3Q13630 321 aaPredicted RBP14.75□□□□□ -0.05
RFFL-201ENST00000315249 CCDC6Q16204 474 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 TMTC1Q8IUR5 882 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 GANCQ8TET4 914 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 NT5C1BQ96P26 610 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 LBHD1Q9BQE6 289 aaPredicted RBP14.75□□□□□ -0.05
RFFL-201ENST00000315249 TMEM47Q9BQJ4 181 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 DDX23Q9BUQ8 820 aaKnown RBP14.75□□□□□ -0.05
RFFL-201ENST00000315249 CPSF3Q9UKF6 684 aaKnown RBP14.75□□□□□ -0.05
RFFL-201ENST00000315249 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 GMPSP49915 693 aaPredicted RBP14.75□□□□□ -0.05
RFFL-201ENST00000315249 PLCB4Q15147 1175 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 KRBA2Q6ZNG9 492 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 PSMC2P35998 433 aaKnown RBP14.75□□□□□ -0.05
RFFL-201ENST00000315249 BFSP1Q12934 665 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 AK8Q96MA6 479 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 LRRC4Q9HBW1 653 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 AMFRQ9UKV5 643 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L15C9J2P7 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L13C9JLJ4 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L11C9JVI0 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L18D6R9N7 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L22D6RA61 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L17D6RBQ6 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L19D6RCP7 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L20D6RJB6 530 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 LRRN2O75325 713 aa14.75□□□□□ -0.05
RFFL-201ENST00000315249 USP17L24Q0WX57 530 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms