RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.03
SKA3-202ENST00000314759 KCTD16Q68DU8 428 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 TEX2Q8IWB9 1127 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 MKNK2Q9HBH9 465 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 MYH14Q7Z406 1995 aaKnown RBP14.87□□□□□ -0.03
SKA3-202ENST00000314759 NAPAP54920 295 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 SKOR1P84550 965 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 KRT25Q7Z3Z0 450 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 ZIM3Q96PE6 472 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 RUFY1Q96T51 708 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 BLOC1S4Q9NUP1 217 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 STX8Q9UNK0 236 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 KRT14P02533 472 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 GLI1P08151 1106 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 TSPY3P0CV98 308 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 TSPY8P0CW00 308 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 SLC1A4P43007 532 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 SV2BQ7L1I2 683 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 CCDC155Q8N6L0 562 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 TMEM47Q9BQJ4 181 aa14.87□□□□□ -0.03
SKA3-202ENST00000314759 SMCO2A6NFE2 343 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 KLRF2D3W0D1 207 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 NDUFAB1O14561 156 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 MAP2K2P36507 400 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 FNTAP49354 379 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 CARSP49589 748 aaKnown RBP14.86□□□□□ -0.03
SKA3-202ENST00000314759 GRB10Q13322 594 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 HGSNATQ68CP4 663 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 DYMQ7RTS9 669 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 NEK8Q86SG6 692 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 CNPY4Q8N129 248 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 CALML4Q96GE6 196 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 ACSBG1Q96GR2 724 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 NOX5Q96PH1 765 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 FAM153BP0C7A2 387 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 HSPA2P54652 639 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 FAM153CQ494X1 144 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 GLE1Q53GS7 698 aaKnown RBP14.86□□□□□ -0.03
SKA3-202ENST00000314759 PDXDC1Q6P996 788 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 TMC4Q7Z404 712 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 PRPF38AQ8NAV1 312 aaKnown RBP14.86□□□□□ -0.03
SKA3-202ENST00000314759 FAM153AQ9UHL3 310 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 CASZ1Q86V15 1759 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 ZSCAN5CA6NGD5 496 aaPredicted RBP14.86□□□□□ -0.03
SKA3-202ENST00000314759 ZEB2O60315 1214 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
SKA3-202ENST00000314759 TXKP42681 527 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 CFAP221Q4G0U5 840 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 LRRC55Q6ZSA7 311 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 UNC13DQ70J99 1090 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 TXNRD3Q86VQ6 643 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 IQCKQ8N0W5 287 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 TBCKQ8TEA7 893 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 GDF3Q9NR23 364 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 NFU1Q9UMS0 254 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 ZNF652Q9Y2D9 606 aa14.86□□□□□ -0.03
SKA3-202ENST00000314759 ABCB11O95342 1321 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 ESYT3A0FGR9 886 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 NAP1L1P55209 391 aaKnown RBP14.85□□□□□ -0.03
SKA3-202ENST00000314759 KCNMA1Q12791 1236 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 NNTQ13423 1086 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
SKA3-202ENST00000314759 GUF1Q8N442 669 aaKnown RBP14.85□□□□□ -0.03
SKA3-202ENST00000314759 RNF10Q8N5U6 811 aaKnown RBP14.85□□□□□ -0.03
SKA3-202ENST00000314759 PNMA5Q96PV4 448 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 PVALEFA0A1B0GWK0 134 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 PSEN1P49768 467 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 CACNA2D4Q7Z3S7 1137 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 IFT20Q8IY31 132 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 GLIS3Q8NEA6 775 aa14.85□□□□□ -0.03
SKA3-202ENST00000314759 SH3RF3Q8TEJ3 882 aaPredicted RBP14.85□□□□□ -0.03
SKA3-202ENST00000314759 JPH2Q9BR39 696 aaPredicted RBP14.85□□□□□ -0.03
SKA3-202ENST00000314759 SSU72P8A0A1W2PR75 194 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 ZNF233A6NK53 670 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 RPS8P62241 208 aaKnown RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 ZNF444Q8N0Y2 327 aaPredicted RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 IFT81Q8WYA0 676 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 CCDC43Q96MW1 224 aaKnown RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 SPZ1Q9BXG8 430 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 EPB41L5Q9HCM4 733 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 C6orf50Q9HD87 102 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 RBAK-RBAKDNI3L0D1 243 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 ZPR1O75312 459 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 FGFR1OPO95684 399 aaKnown RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 GNA11P29992 359 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 GUCY2DQ02846 1103 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 LRRC63Q05C16 580 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 SF3B2Q13435 895 aaKnown RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 LRRC41Q15345 812 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 TDRD12Q587J7 1177 aaKnown RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 LARP4BQ92615 738 aaKnown RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 LZTS2Q9BRK4 669 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 BIN2Q9UBW5 565 aaPredicted RBP14.84□□□□□ -0.03
SKA3-202ENST00000314759 DOT1LQ8TEK3 1739 aa14.84□□□□□ -0.03
SKA3-202ENST00000314759 TLR2O60603 784 aa14.83□□□□□ -0.03
SKA3-202ENST00000314759 HEXIM1O94992 359 aaKnown RBP14.83□□□□□ -0.03
SKA3-202ENST00000314759 DNA2P51530 1060 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms