RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 FIGNQ5HY92 759 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 DZIP3Q86Y13 1208 aaKnown RBP16.19■□□□□ 0.18
COL6A2-202ENST00000310645 ZSCAN29Q8IWY8 852 aaPredicted RBP16.19■□□□□ 0.18
COL6A2-202ENST00000310645 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 CCNT1O60563 726 aaKnown RBP16.19■□□□□ 0.18
COL6A2-202ENST00000310645 KLRC1P26715 233 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 QPCTQ16769 361 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 KIRREL3Q8IZU9 778 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 UBLCP1Q8WVY7 318 aaPredicted RBP16.19■□□□□ 0.18
COL6A2-202ENST00000310645 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
COL6A2-202ENST00000310645 HMGB1P1B2RPK0 211 aaPredicted RBP16.19■□□□□ 0.18
COL6A2-202ENST00000310645 CTNNA1P35221 906 aaKnown RBP16.19■□□□□ 0.18
COL6A2-202ENST00000310645 DNAAF5Q86Y56 855 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 CCSER1Q9C0I3 900 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 PCDHA6Q9UN73 950 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 PCDHA8Q9Y5H6 950 aa16.19■□□□□ 0.18
COL6A2-202ENST00000310645 ELF1P32519 619 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 CHRNDQ07001 517 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
COL6A2-202ENST00000310645 TBC1D5Q92609 795 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 JAG2Q9Y219 1238 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 FAM170AA1A519 330 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 KCNK3O14649 394 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
COL6A2-202ENST00000310645 KIF5BP33176 963 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 MAN2A1Q16706 1144 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 TAF4BQ92750 862 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 AP1M1Q9BXS5 423 aa16.18■□□□□ 0.18
COL6A2-202ENST00000310645 DDX20Q9UHI6 824 aaKnown RBP16.18■□□□□ 0.18
COL6A2-202ENST00000310645 GMNCA6NCL1 334 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 TNFRSF8P28908 595 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 HNRNPH3P31942 346 aaKnown RBP16.17■□□□□ 0.18
COL6A2-202ENST00000310645 SNCBQ16143 134 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 KIAA0753Q2KHM9 967 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 PACSIN1Q9BY11 444 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
COL6A2-202ENST00000310645 DNM1LO00429 736 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 RASSF9O75901 435 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 RPSAP08865 295 aaKnown RBP16.17■□□□□ 0.18
COL6A2-202ENST00000310645 GOLGA8HP0CJ92 632 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 POLR2FP61218 127 aaKnown RBP16.17■□□□□ 0.18
COL6A2-202ENST00000310645 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 PDXDC1Q6P996 788 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 YTHDF3Q7Z739 585 aaKnown RBP16.17■□□□□ 0.18
COL6A2-202ENST00000310645 WHAMMQ8TF30 809 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 ADAMTS1Q9UHI8 967 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 NOVA2Q9UNW9 492 aaKnown RBP16.17■□□□□ 0.18
COL6A2-202ENST00000310645 CEP104O60308 925 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 HSD17B3P37058 310 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 TXKP42681 527 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 MMP14P50281 582 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 RAPGEF1Q13905 1077 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 PARP9Q8IXQ6 854 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 ARFGAP2Q8N6H7 521 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 BAP1Q92560 729 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 OSBPL7Q9BZF2 842 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 VEZTQ9HBM0 779 aa16.17■□□□□ 0.18
COL6A2-202ENST00000310645 PARP4Q9UKK3 1724 aaKnown RBP16.17■□□□□ 0.18
COL6A2-202ENST00000310645 PHF20L1A8MW92 1017 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 OPLAHO14841 1288 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 MYL1P05976 194 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 CHRM1P11229 460 aaPredicted RBP16.16■□□□□ 0.18
COL6A2-202ENST00000310645 CDC37Q16543 378 aaPredicted RBP16.16■□□□□ 0.18
COL6A2-202ENST00000310645 CYB5D1Q6P9G0 228 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 CPLX4Q7Z7G2 160 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 GLIS3Q8NEA6 775 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 TMBIM4Q9HC24 238 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 ATXN2Q99700 1313 aaKnown RBP16.16■□□□□ 0.18
COL6A2-202ENST00000310645 EVA1CP58658 441 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 ERVK-9P63128 1117 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 TNNC1P63316 161 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 AMPD3Q01432 767 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 SFMBT2Q5VUG0 894 aa16.16■□□□□ 0.18
COL6A2-202ENST00000310645 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 TFAP4Q01664 338 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 PREPLQ4J6C6 727 aaPredicted RBP16.15■□□□□ 0.18
COL6A2-202ENST00000310645 RNF10Q8N5U6 811 aaKnown RBP16.15■□□□□ 0.18
COL6A2-202ENST00000310645 PNMA1Q8ND90 353 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 TBC1D31Q96DN5 1066 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
COL6A2-202ENST00000310645 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 MCM8Q9UJA3 840 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 TIAM2Q8IVF5 1701 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 PJA2O43164 708 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 LCA5LO95447 670 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 FUKQ8N0W3 1084 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 CALML4Q96GE6 196 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 SEC16BQ96JE7 1060 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 TRIM31Q9BZY9 425 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 TBC1D7Q9P0N9 293 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 FER1L4A9Z1Z3 1794 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 TMCO5BA8MYB1 307 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 HGSNATQ68CP4 663 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 PPP4R3AQ6IN85 833 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 CENPPQ6IPU0 288 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 SV2BQ7L1I2 683 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms