RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 KRT86O43790 486 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 ONECUT3O60422 494 aaPredicted RBP16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 ERLIN1O75477 346 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 SCNN1DP51172 638 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 LRRC41Q15345 812 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 MAN2A1Q16706 1144 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 HDXQ7Z353 690 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 RAB34Q9BZG1 259 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 DDX25Q9UHL0 483 aaKnown RBP16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 DUSP10Q9Y6W6 482 aa16.93■□□□□ 0.3
SPIRE1-201ENST00000309836 ABCB11O95342 1321 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 MYH4Q9Y623 1939 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 ERICH4A6NGS2 130 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 IDEP14735 1019 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 VAV2P52735 878 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 CCDC96Q2M329 555 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 KCTD1Q719H9 257 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 KRT26Q7Z3Y9 468 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 EHBP1Q8NDI1 1231 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 CUL5Q93034 780 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 DNAJC19Q96DA6 116 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 IQCDQ96DY2 449 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 SAR1BQ9Y6B6 198 aa16.92■□□□□ 0.3
SPIRE1-201ENST00000309836 NRXN2Q9P2S2 1712 aa16.91■□□□□ 0.3
SPIRE1-201ENST00000309836 USP14P54578 494 aa16.91■□□□□ 0.3
SPIRE1-201ENST00000309836 LRRC63Q05C16 580 aa16.91■□□□□ 0.3
SPIRE1-201ENST00000309836 DOK7Q18PE1 504 aa16.91■□□□□ 0.3
SPIRE1-201ENST00000309836 ARHGAP20Q9P2F6 1191 aa16.91■□□□□ 0.3
SPIRE1-201ENST00000309836 SIPA1L1O43166 1804 aa16.91■□□□□ 0.3
SPIRE1-201ENST00000309836 ZBTB5O15062 677 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 COASYQ13057 564 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 PSMD2Q13200 908 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 ZCWPW2Q504Y3 356 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 WDR93Q6P2C0 686 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 ZFPM1Q8IX07 1006 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 MSL3Q8N5Y2 521 aaKnown RBP16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 PDE11AQ9HCR9 933 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 FAM207AQ9NSI2 230 aaPredicted RBP16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 PLAGL2Q9UPG8 496 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 AFF2P51816 1311 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 IPO7O95373 1038 aaKnown RBP16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 FGFR1OPO95684 399 aaKnown RBP16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 ATP2B2Q01814 1243 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 NFIAQ12857 509 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 HYIQ5T013 277 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 GPATCH4Q5T3I0 446 aaKnown RBP16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 APOBEC3HQ6NTF7 200 aaKnown RBP16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 BAP1Q92560 729 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 CAPZA3Q96KX2 299 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 FGFBP2Q9BYJ0 223 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 LRRC27Q9C0I9 530 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 GBP3Q9H0R5 595 aa16.9■□□□□ 0.3
SPIRE1-201ENST00000309836 ANO9A1A5B4 782 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 MACROD2A1Z1Q3 448 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 PDE2AO00408 941 aaPredicted RBP16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 MPHOSPH10O00566 681 aaKnown RBP16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 HOXA7P31268 230 aaPredicted RBP16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 MRPL12P52815 198 aaKnown RBP16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 GYS2P54840 703 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 SHROOM1Q2M3G4 852 aaPredicted RBP16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 FOXR2Q6PJQ5 311 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 CCDC42Q96M95 316 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 DNAJC18Q9H819 358 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 MMRN2Q9H8L6 949 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 PSTPIP2Q9H939 334 aa16.89■□□□□ 0.29
SPIRE1-201ENST00000309836 LCA5LO95447 670 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 TUBBP07437 444 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 GCFC2P16383 781 aaKnown RBP16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 HHIPL2Q6UWX4 724 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 GPIHBP1Q8IV16 184 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 SECISBP2LQ93073 1101 aaKnown RBP16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 UIMC1Q96RL1 719 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 TSG101Q99816 390 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 TSGA10Q9BZW7 698 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 ZC3H12CQ9C0D7 883 aaKnown RBP16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 PCDHA13Q9Y5I0 950 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 LRRC53A6NM62 1247 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 ZNF185O15231 689 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 KIF11P52732 1056 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 CKAP4Q07065 602 aaKnown RBP16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 KIF5AQ12840 1032 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 CASP8Q14790 479 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 SEPT2Q15019 361 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 SPA17Q15506 151 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 MEX3CQ5U5Q3 659 aaKnown RBP16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 MYOCDQ8IZQ8 938 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 SH2D4AQ9H788 454 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 PANK4Q9NVE7 773 aa16.88■□□□□ 0.29
SPIRE1-201ENST00000309836 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms