RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 STK17AQ9UEE5 414 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 LRWD1Q9UFC0 647 aa13.37□□□□□ -0.27
TRIM40-205ENST00000307859 MRPL11Q9Y3B7 192 aaKnown RBP13.37□□□□□ -0.27
TRIM40-205ENST00000307859 ZNF536O15090 1300 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 POTEMA6NI47 508 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 TBX3O15119 743 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 SLC26A4O43511 780 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 RPN1P04843 607 aaKnown RBP13.36□□□□□ -0.27
TRIM40-205ENST00000307859 ICAM1P05362 532 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 GRB10Q13322 594 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 MTMR2Q13614 643 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 KCNB1Q14721 858 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
TRIM40-205ENST00000307859 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
TRIM40-205ENST00000307859 PNMA5Q96PV4 448 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 EMILIN3Q9NT22 766 aa13.36□□□□□ -0.27
TRIM40-205ENST00000307859 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRIM40-205ENST00000307859 GCOM1H8Y6P7 765 aaPredicted RBP13.35□□□□□ -0.27
TRIM40-205ENST00000307859 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
TRIM40-205ENST00000307859 PTPRAP18433 802 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 VCAM1P19320 739 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
TRIM40-205ENST00000307859 GHRHRQ02643 423 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 TMEM119Q4V9L6 283 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 ZNF658Q5TYW1 1059 aaPredicted RBP13.35□□□□□ -0.27
TRIM40-205ENST00000307859 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 ETNPPLQ8TBG4 499 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 LENG9Q96B70 501 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 C12orf42Q96LP6 360 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 MED15Q96RN5 788 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 PLIN2Q99541 437 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 KLRC4O43908 158 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 ZNF18P17022 549 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 MSNP26038 577 aaKnown RBP13.35□□□□□ -0.27
TRIM40-205ENST00000307859 BACE1P56817 501 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 SPP2Q13103 211 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 SUPT20HL1Q3ZLR7 823 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 HYIQ5T013 277 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 KRT79Q5XKE5 535 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 ZNF280CQ8ND82 737 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 SNX29Q8TEQ0 813 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
TRIM40-205ENST00000307859 ZIC5Q96T25 663 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 C7orf25Q9BPX7 421 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 SLC38A10Q9HBR0 1119 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 PICK1Q9NRD5 415 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 FANCLQ9NW38 375 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 PPP1R9AQ9ULJ8 1098 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 WDR81Q562E7 1941 aa13.35□□□□□ -0.27
TRIM40-205ENST00000307859 A0A0G2JMZ2 1700 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 SYNRGQ9UMZ2 1314 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 FAM86B1E9PN63 330 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 CFBP00751 764 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 FAM86B2P0C5J1 330 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 ATP1A3P13637 1013 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 CLCN1P35523 988 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 HSD17B4P51659 736 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 FANCCQ00597 558 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIM40-205ENST00000307859 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 FAM20AQ96MK3 541 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 TRIM9Q9C026 710 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 TANGO6Q9C0B7 1094 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 XPO4Q9C0E2 1151 aaKnown RBP13.34□□□□□ -0.27
TRIM40-205ENST00000307859 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 PNMA2Q9UL42 364 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 CCPG1Q9ULG6 757 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 KIAA1217Q5T5P2 1943 aa13.34□□□□□ -0.27
TRIM40-205ENST00000307859 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.27
TRIM40-205ENST00000307859 IGLV3-22A0A075B6J6 115 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 ZNF500O60304 480 aaPredicted RBP13.33□□□□□ -0.28
TRIM40-205ENST00000307859 MARCH6O60337 910 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 RHOBTB3O94955 611 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 FDX1P10109 184 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 AMPD3Q01432 767 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 SPIRE1Q08AE8 756 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 PRR16Q569H4 304 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 CNNM4Q6P4Q7 775 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 DRC7Q8IY82 874 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 TRMT44Q8IYL2 757 aaKnown RBP13.33□□□□□ -0.28
TRIM40-205ENST00000307859 CLEC4DQ8WXI8 215 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 CDK5RAP3Q96JB5 506 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 AGBL1Q96MI9 1066 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 RPAP3Q9H6T3 665 aaPredicted RBP13.33□□□□□ -0.28
TRIM40-205ENST00000307859 EHMT1Q9H9B1 1298 aa13.33□□□□□ -0.28
TRIM40-205ENST00000307859 LCTP09848 1927 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms