RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SUPT3HO75486 399 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 SEC24DO94855 1032 aaPredicted RBP13.73□□□□□ -0.21
USP38-201ENST00000307017 ZNF18P17022 549 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 DARS2Q6PI48 645 aaKnown RBP13.73□□□□□ -0.21
USP38-201ENST00000307017 DNAJC10Q8IXB1 793 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 SDCCAG3Q96C92 435 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 C1orf112Q9NSG2 853 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 BAG5Q9UL15 447 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 CAPN11Q9UMQ6 739 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 SPAG7O75391 227 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 GCP02774 474 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 RANBP1P43487 201 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 MAPK4P31152 587 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 P3H4Q92791 437 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 TUBGCP2Q9BSJ2 902 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 PPFIA4O75335 1185 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 KRT1P04264 644 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 TUBB4BP68371 445 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 KIF19Q2TAC6 998 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 KDELC2Q7Z4H8 507 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 TTC7AQ9ULT0 858 aaPredicted RBP13.73□□□□□ -0.21
USP38-201ENST00000307017 BRD1O95696 1058 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 FGAP02671 866 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 DNM2P50570 870 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 PSMD2Q13200 908 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 PDCLQ13371 301 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 SLMAPQ14BN4 828 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 KCTD6Q8NC69 237 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 ANTXR1Q9H6X2 564 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 ANAPC5Q9UJX4 755 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 A6NJR5 290 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
USP38-201ENST00000307017 HIBCHQ6NVY1 386 aaPredicted RBP13.72□□□□□ -0.21
USP38-201ENST00000307017 STRIP2Q9ULQ0 834 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 ADCY9O60503 1353 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 TTC17Q96AE7 1141 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 NLRP7Q8WX94 980 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 NHEJ1Q9H9Q4 299 aaPredicted RBP13.72□□□□□ -0.21
USP38-201ENST00000307017 VCX3AQ9NNX9 186 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
USP38-201ENST00000307017 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
USP38-201ENST00000307017 TNKSO95271 1327 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 HOXA13P31271 388 aaPredicted RBP13.72□□□□□ -0.21
USP38-201ENST00000307017 FAM180AQ6UWF9 173 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.215e-6■■■■■ 46.2
USP38-201ENST00000307017 M0QZ92 97 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 YWHAHQ04917 246 aaPredicted RBP13.72□□□□□ -0.21
USP38-201ENST00000307017 HOMER3Q9NSC5 361 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 GPC4O75487 556 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 CPP00450 1065 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 ATP1A3P13637 1013 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 SLC9A5Q14940 896 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 MFSD14BQ5SR56 506 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 MIGA2Q7L4E1 593 aa13.72□□□□□ -0.21
USP38-201ENST00000307017 ZMYM6O95789 1325 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 ART3Q13508 389 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 FBXO38Q6PIJ6 1188 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 FAM149B1Q96BN6 582 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 USP27XA6NNY8 438 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 AGRPO00253 132 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 DMP1Q13316 513 aaPredicted RBP13.71□□□□□ -0.21
USP38-201ENST00000307017 LRRC36Q1X8D7 754 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 SEPT8Q92599 483 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 DCTN4Q9UJW0 460 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 MAP3K7O43318 606 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 SUN1O94901 812 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 TTC4O95801 387 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 GUCY2CP25092 1073 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 OTULINQ96BN8 352 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 TNNC2P02585 160 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 HADHQ16836 314 aaKnown RBP13.71□□□□□ -0.21
USP38-201ENST00000307017 PLA2G4DQ86XP0 818 aa13.71□□□□□ -0.21
USP38-201ENST00000307017 TRPM2O94759 1503 aa13.71□□□□□ -0.22
USP38-201ENST00000307017 C11orf74Q86VG3 221 aa13.71□□□□□ -0.22
USP38-201ENST00000307017 RNF135Q8IUD6 432 aa13.71□□□□□ -0.22
USP38-201ENST00000307017 RFWD2Q8NHY2 731 aa13.71□□□□□ -0.22
USP38-201ENST00000307017 ARL8AQ96BM9 186 aa13.71□□□□□ -0.22
USP38-201ENST00000307017 CPVLQ9H3G5 476 aa13.71□□□□□ -0.22
USP38-201ENST00000307017 TADA3O75528 432 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 PLAAQ9Y263 795 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 TRIM49BA6NDI0 452 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 TMEM191BP0C7N4 346 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 PNMA1Q8ND90 353 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 GRK7Q8WTQ7 553 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 DYNLL2Q96FJ2 89 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 CEP19Q96LK0 163 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 CYP4F11Q9HBI6 524 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 OR52Z1P0C646 297 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
USP38-201ENST00000307017 IL9RQ01113 521 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 GCKRQ14397 625 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 ODR4Q5SWX8 454 aa13.7□□□□□ -0.22
USP38-201ENST00000307017 CCDC90BQ9GZT6 254 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms