RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 TAPT1Q6NXT6 567 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 SEPT14Q6ZU15 432 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 PDGFCQ9NRA1 345 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 SYNRGQ9UMZ2 1314 aa12.59□□□□□ -0.39
CSPG4P2Y-201ENST00000306853 ZEB2O60315 1214 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PGK1P00558 417 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 C6orf222P0C671 652 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PCNX4Q63HM2 1172 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KCNV1Q6PIU1 500 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 NECAB2Q7Z6G3 386 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 FAM184AQ8NB25 1140 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 OR6J1Q8NGC5 347 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 IL31RAQ8NI17 732 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 C11orf49Q9H6J7 331 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 RBM47A0AV96 593 aaKnown RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 TXNP10599 105 aaKnown RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 SMPD1P17405 629 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 LRRC41Q15345 812 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 BRDTQ58F21 947 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GJC2Q5T442 439 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GALNT17Q6IS24 598 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 VSIG10LQ86VR7 867 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PAWRQ96IZ0 340 aaKnown RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 AIFM3Q96NN9 605 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 HTATIP2Q9BUP3 242 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 UPF3AQ9H1J1 476 aaKnown RBP12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 TMEM260Q9NX78 707 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PCDHA4Q9UN74 947 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 Q9Y3F1 56 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KIF3AQ9Y496 699 aa12.57□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 DYNC1LI2O43237 492 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ADCY6O43306 1168 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 JAK2O60674 1132 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ADAMTS4O75173 837 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GH1P01241 217 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ZNF76P36508 570 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 RGS19P49795 217 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CPT1AP50416 773 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GJA9P57773 515 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ST3GAL1Q11201 340 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 BLIDQ8IZY5 108 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 DIS3LQ8TF46 1054 aaKnown RBP12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GNEQ9Y223 722 aaKnown RBP12.56□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 MOXD2PA6NHM9 499 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 FIBPO43427 364 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 TGFB3P10600 412 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CST5P28325 142 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 SREBF1P36956 1147 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 FOSBP53539 338 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 MRPS9P82933 396 aaKnown RBP12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 LY6KQ17RY6 165 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GNASQ5JWF2 1037 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 DAGLBQ8NCG7 672 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 RASGRP4Q8TDF6 673 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GPRASP2Q96D09 838 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 INPP4AQ96PE3 977 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 SENP6Q9GZR1 1112 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 RTEL1Q9NZ71 1219 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KCNJ14Q9UNX9 436 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 BRCA2P51587 3418 aa12.55□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 DTNBO60941 627 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ARIH2O95376 493 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KRT2P35908 639 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ARHGAP4P98171 946 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 BEX3Q00994 111 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 MTMR1Q13613 665 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KCNA10Q16322 511 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 DHX37Q8IY37 1157 aaKnown RBP12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KLHDC9Q8NEP7 349 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 C8orf76Q96K31 380 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms