RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 RRAGBQ5VZM2 374 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 GPAT2Q6NUI2 795 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 ETNPPLQ8TBG4 499 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 ERCC4Q92889 916 aaPredicted RBP19.76■□□□□ 0.75
KRT28-201ENST00000306658 CALML4Q96GE6 196 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 ANO10Q9NW15 660 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 FBXO40Q9UH90 709 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 PNMA3Q9UL41 463 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 IGLV3-22A0A075B6J6 115 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 UBXN2AP68543 259 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 SETQ01105 290 aaPredicted RBP19.75■□□□□ 0.75
KRT28-201ENST00000306658 PNOCQ13519 176 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 BAATQ14032 418 aaPredicted RBP19.75■□□□□ 0.75
KRT28-201ENST00000306658 CST9Q5W186 159 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 KRT79Q5XKE5 535 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 SLC30A10Q6XR72 485 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 RIOX2Q8IUF8 465 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 BTBD7Q9P203 1132 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 TUBE1Q9UJT0 475 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 ZBTB48P10074 688 aaPredicted RBP19.75■□□□□ 0.75
KRT28-201ENST00000306658 PCNX4Q63HM2 1172 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 PLA2G4DQ86XP0 818 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 PAGE5Q96GU1 130 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 TAAR1Q96RJ0 339 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 RMDN3Q96TC7 470 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 SPATC1LQ9H0A9 340 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 CUEDC2Q9H467 287 aa19.75■□□□□ 0.75
KRT28-201ENST00000306658 FRMPD4Q14CM0 1322 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 POTEMA6NI47 508 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 MEIS1O00470 390 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 MSH4O15457 936 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 ANO6Q4KMQ2 910 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 PDXDC2PQ6P474 469 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 SH3RF1Q7Z6J0 888 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 RNF214Q8ND24 703 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 CYP2W1Q8TAV3 490 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 MS4A4AQ96JQ5 239 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 MXRA8Q9BRK3 442 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 SLC45A1Q9Y2W3 748 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 STK24Q9Y6E0 443 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 A0A0G2JMZ2 1700 aa19.74■□□□□ 0.75
KRT28-201ENST00000306658 TRPM7Q96QT4 1865 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 FOXN1O15353 648 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 SMC2O95347 1197 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 XRCC6P12956 609 aaKnown RBP eCLIP19.73■□□□□ 0.75
KRT28-201ENST00000306658 COPB2P35606 906 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 ARHGEF16Q5VV41 709 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 SPRYD7Q5W111 196 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 XRRA1Q6P2D8 792 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 POTEEQ6S8J3 1075 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 NIPA1Q7RTP0 329 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 GTF3C2Q8WUA4 911 aaPredicted RBP19.73■□□□□ 0.75
KRT28-201ENST00000306658 SMARCE1Q969G3 411 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 GJA10Q969M2 543 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 CDK5RAP3Q96JB5 506 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 PAGR1Q9BTK6 254 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 MAGEF1Q9HAY2 307 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 A1CFQ9NQ94 594 aaKnown RBP19.73■□□□□ 0.75
KRT28-201ENST00000306658 PXMP2Q9NR77 195 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 CYP39A1Q9NYL5 469 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 PCDHA5Q9Y5H7 936 aa19.73■□□□□ 0.75
KRT28-201ENST00000306658 CCL15-CCL14A0A0B4J2E2 113 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 SLC26A4O43511 780 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 SLC25A27O95847 323 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 AFMP43652 599 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 HUNKP57058 714 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 PGM5Q15124 567 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 CCL15Q16663 113 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 FAM200AQ8TCP9 573 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 SNX29Q8TEQ0 813 aa19.72■□□□□ 0.75
KRT28-201ENST00000306658 MMTAG2Q9BU76 263 aaKnown RBP19.72■□□□□ 0.75
KRT28-201ENST00000306658 BCRP11274 1271 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 PLCG1P19174 1290 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 EIF2AK2P19525 551 aaKnown RBP19.71■□□□□ 0.75
KRT28-201ENST00000306658 NLRP12P59046 1061 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 NT5DC1Q5TFE4 455 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 GRAMD1CQ8IYS0 662 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 NSUN6Q8TEA1 469 aaKnown RBP19.71■□□□□ 0.75
KRT28-201ENST00000306658 PDCD2LQ9BRP1 358 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 NAT10Q9H0A0 1025 aaKnown RBP19.71■□□□□ 0.75
KRT28-201ENST00000306658 DNAJC25Q9H1X3 360 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 PFASO15067 1338 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 BIN1O00499 593 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 ZNF165P49910 485 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 MKRN3Q13064 507 aaKnown RBP19.71■□□□□ 0.75
KRT28-201ENST00000306658 UVSSAQ2YD98 709 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 NAALADL2Q58DX5 795 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 NCAPG2Q86XI2 1143 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 ANKRD35Q8N283 1001 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 ERMNQ8TAM6 284 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 SPATA20Q8TB22 786 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 UIMC1Q96RL1 719 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 PLIN2Q99541 437 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 GPBP1L1Q9HC44 474 aaPredicted RBP19.71■□□□□ 0.75
KRT28-201ENST00000306658 RBPJLQ9UBG7 517 aa19.71■□□□□ 0.75
KRT28-201ENST00000306658 KDM3AQ9Y4C1 1321 aa19.7■□□□□ 0.74
KRT28-201ENST00000306658 PDHXO00330 501 aa19.7■□□□□ 0.74
KRT28-201ENST00000306658 CNMDO75829 334 aa19.7■□□□□ 0.74
KRT28-201ENST00000306658 MYL1P05976 194 aa19.7■□□□□ 0.74
KRT28-201ENST00000306658 PRR29P0C7W0 189 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms