RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 HAUS3Q68CZ6 603 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 CDAN1Q8IWY9 1227 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 CCDC51Q96ER9 411 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 C16orf45Q96MC5 204 aaPredicted RBP21.73■■□□□ 1.07
HOXC4-201ENST00000303406 PANX2Q96RD6 677 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 NUDT12Q9BQG2 462 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 EHMT1Q9H9B1 1298 aa21.73■■□□□ 1.07
HOXC4-201ENST00000303406 TEX33O43247 280 aa21.72■■□□□ 1.07
HOXC4-201ENST00000303406 EHHADHQ08426 723 aa21.72■■□□□ 1.07
HOXC4-201ENST00000303406 PTPN14Q15678 1187 aa21.72■■□□□ 1.07
HOXC4-201ENST00000303406 MIGA2Q7L4E1 593 aa21.72■■□□□ 1.07
HOXC4-201ENST00000303406 FAM114A1Q8IWE2 563 aa21.72■■□□□ 1.07
HOXC4-201ENST00000303406 ERMNQ8TAM6 284 aa21.72■■□□□ 1.07
HOXC4-201ENST00000303406 LENG9Q96B70 501 aa21.72■■□□□ 1.07
HOXC4-201ENST00000303406 NAA15Q9BXJ9 866 aaKnown RBP21.72■■□□□ 1.07
HOXC4-201ENST00000303406 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.72■■□□□ 1.07
HOXC4-201ENST00000303406 USP27XA6NNY8 438 aa21.71■■□□□ 1.07
HOXC4-201ENST00000303406 AKR1B15C9JRZ8 316 aaPredicted RBP21.71■■□□□ 1.07
HOXC4-201ENST00000303406 DYNC1I1O14576 645 aa21.71■■□□□ 1.07
HOXC4-201ENST00000303406 CCT6AP40227 531 aaKnown RBP21.71■■□□□ 1.07
HOXC4-201ENST00000303406 STK4Q13043 487 aa21.71■■□□□ 1.07
HOXC4-201ENST00000303406 PPFIBP1Q86W92 1011 aa21.71■■□□□ 1.07
HOXC4-201ENST00000303406 IRF2BP1Q8IU81 584 aa21.71■■□□□ 1.07
HOXC4-201ENST00000303406 LPAR1Q92633 364 aa21.71■■□□□ 1.07
HOXC4-201ENST00000303406 TRIM47Q96LD4 638 aa21.71■■□□□ 1.07
HOXC4-201ENST00000303406 BAG1Q99933 345 aaPredicted RBP21.71■■□□□ 1.07
HOXC4-201ENST00000303406 GCOM1H8Y6P7 765 aaPredicted RBP21.7■■□□□ 1.07
HOXC4-201ENST00000303406 N4BP3O15049 544 aa21.7■■□□□ 1.07
HOXC4-201ENST00000303406 POLR2MP0CAP2 368 aa21.7■■□□□ 1.07
HOXC4-201ENST00000303406 SPIRE1Q08AE8 756 aa21.7■■□□□ 1.07
HOXC4-201ENST00000303406 GUF1Q8N442 669 aaKnown RBP21.7■■□□□ 1.07
HOXC4-201ENST00000303406 PPP1R13BQ96KQ4 1090 aa21.7■■□□□ 1.07
HOXC4-201ENST00000303406 BMP2KQ9NSY1 1161 aaPredicted RBP21.7■■□□□ 1.07
HOXC4-201ENST00000303406 MAPK8IP1Q9UQF2 711 aa21.7■■□□□ 1.07
HOXC4-201ENST00000303406 A0A1W2PQC6 194 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 WDR46O15213 610 aaKnown RBP21.7■■□□□ 1.06
HOXC4-201ENST00000303406 CTNND1O60716 968 aaKnown RBP21.7■■□□□ 1.06
HOXC4-201ENST00000303406 PTGER2P43116 358 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 CEP135Q66GS9 1140 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 CENPPQ6IPU0 288 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 KCNK18Q7Z418 384 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 CNGA4Q8IV77 575 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 KIAA0895Q8NCT3 520 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 DUSP9Q99956 384 aaKnown RBP21.7■■□□□ 1.06
HOXC4-201ENST00000303406 KIAA1683Q9H0B3 1180 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 MAGEC2Q9UBF1 373 aaPredicted RBP21.7■■□□□ 1.06
HOXC4-201ENST00000303406 BCS1LQ9Y276 419 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 RABGAP1Q9Y3P9 1069 aa21.7■■□□□ 1.06
HOXC4-201ENST00000303406 TRIM49BA6NDI0 452 aa21.69■■□□□ 1.06
HOXC4-201ENST00000303406 ZSCAN12O43309 604 aa21.69■■□□□ 1.06
HOXC4-201ENST00000303406 TPM1P09493 284 aa21.69■■□□□ 1.06
HOXC4-201ENST00000303406 FECHP22830 423 aa21.69■■□□□ 1.06
HOXC4-201ENST00000303406 GMPSP49915 693 aaPredicted RBP21.69■■□□□ 1.06
HOXC4-201ENST00000303406 PMS1P54277 932 aaKnown RBP21.69■■□□□ 1.06
HOXC4-201ENST00000303406 ECM1Q16610 540 aa21.69■■□□□ 1.06
HOXC4-201ENST00000303406 PRR16Q569H4 304 aa21.69■■□□□ 1.06
HOXC4-201ENST00000303406 PNMA2Q9UL42 364 aa21.69■■□□□ 1.06
HOXC4-201ENST00000303406 SHTN1A0MZ66 631 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 GOLGA6L9A6NEM1 432 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 LGALS16A8MUM7 142 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 FCER1AP12319 257 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 GHRHRQ02643 423 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 MICALL2Q8IY33 904 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 CSGALNACT2Q8N6G5 542 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 SAMD3Q8N6K7 520 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 DDX12PQ92771 950 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 KIFC2Q96AC6 838 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 DNAJC19Q96DA6 116 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 HOOK2Q96ED9 719 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 SRRTQ9BXP5 876 aaKnown RBP21.68■■□□□ 1.06
HOXC4-201ENST00000303406 TAB2Q9NYJ8 693 aa21.68■■□□□ 1.06
HOXC4-201ENST00000303406 PITPNM2Q9BZ72 1349 aa21.67■■□□□ 1.06
HOXC4-201ENST00000303406 FAM86B1E9PN63 330 aa21.67■■□□□ 1.06
HOXC4-201ENST00000303406 MFAP3LO75121 409 aa21.67■■□□□ 1.06
HOXC4-201ENST00000303406 FGFR1OPO95684 399 aaKnown RBP21.67■■□□□ 1.06
HOXC4-201ENST00000303406 FAM86B2P0C5J1 330 aa21.67■■□□□ 1.06
HOXC4-201ENST00000303406 RPA1P27694 616 aa21.67■■□□□ 1.06
HOXC4-201ENST00000303406 FEZ1Q99689 392 aa21.67■■□□□ 1.06
HOXC4-201ENST00000303406 TRMT1Q9NXH9 659 aaKnown RBP21.67■■□□□ 1.06
HOXC4-201ENST00000303406 ICAM1P05362 532 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 PLA2G4BP0C869 781 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 LRRC63Q05C16 580 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 DCAF15Q66K64 600 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 ANKRD40Q6AI12 368 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 POLR3CQ9BUI4 534 aaPredicted RBP21.66■■□□□ 1.06
HOXC4-201ENST00000303406 ZNF341Q9BYN7 854 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 VPS16Q9H269 839 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 CNOT7Q9UIV1 285 aaKnown RBP21.66■■□□□ 1.06
HOXC4-201ENST00000303406 KIAA1024Q9UPX6 916 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 DOCK1Q14185 1865 aa21.66■■□□□ 1.06
HOXC4-201ENST00000303406 IGLV3-22A0A075B6J6 115 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 MSH4O15457 936 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 COBLO75128 1261 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 HOXA13P31271 388 aaPredicted RBP21.65■■□□□ 1.06
HOXC4-201ENST00000303406 ZNF76P36508 570 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 ADKP55263 362 aaKnown RBP21.65■■□□□ 1.06
HOXC4-201ENST00000303406 RBL2Q08999 1139 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 PTPN21Q16825 1174 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 CCDC174Q6PII3 467 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 LDHDQ86WU2 507 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms