RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ZSCAN10Q96SZ4 725 aaPredicted RBP12.21□□□□□ -0.45
GCN1-201ENST00000300648 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 GOLGA8MH3BSY2 632 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 TRIML2Q8N7C3 387 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 TUBGCP2Q9BSJ2 902 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 ZSWIM6Q9HCJ5 1215 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 TTLL3Q9Y4R7 772 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 MYH10P35580 1976 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 SPARCL1Q14515 664 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 SGO2Q562F6 1265 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 DCAF15Q66K64 600 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 RCN2Q14257 317 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 CWF19L2Q2TBE0 894 aaKnown RBP12.21□□□□□ -0.45
GCN1-201ENST00000300648 RHOT2Q8IXI1 618 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 MAGOHBQ96A72 148 aaKnown RBP12.21□□□□□ -0.45
GCN1-201ENST00000300648 TLK1Q9UKI8 766 aa12.21□□□□□ -0.45
GCN1-201ENST00000300648 HNRNPRO43390 633 aaKnown RBP12.21□□□□□ -0.46
GCN1-201ENST00000300648 ESRRAP11474 423 aaPredicted RBP12.21□□□□□ -0.46
GCN1-201ENST00000300648 SERPINB4P48594 390 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 CENPUQ71F23 418 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.46
GCN1-201ENST00000300648 MORC4Q8TE76 937 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 GRAMD1AQ96CP6 724 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 KDRP35968 1356 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 MYOM2P54296 1465 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 HNRNPCL2B2RXH8 293 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.46
GCN1-201ENST00000300648 SGK1O00141 431 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 LPXNO60711 386 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 KRT19P08727 400 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 ITGA6P23229 1130 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 FKBP3Q00688 224 aaKnown RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 LRRC43Q8N309 656 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 AS3MTQ9HBK9 375 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 TMOD1P28289 359 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 MYL7Q01449 175 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 NNTQ13423 1086 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 PDIK1LQ8N165 341 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 POMGNT1Q8WZA1 660 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 ZNF212Q9UDV6 495 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 YEATS2Q9ULM3 1422 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 LRRC63Q05C16 580 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 ADAM9Q13443 819 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 MRPL11Q9Y3B7 192 aaKnown RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 APOA1P02647 267 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 PAMP19021 973 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 TAC1P20366 129 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 EHHADHQ08426 723 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 BSPRYQ5W0U4 402 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 RAPH1Q70E73 1250 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 DESI2Q9BSY9 194 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 MIF4GDA9UHW6 222 aaKnown RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 ARHGAP44Q17R89 818 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 SESTD1Q86VW0 696 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 TRIM55Q9BYV6 548 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 TMEM206Q9H813 350 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 CHL1O00533 1208 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 MT-ND3P03897 115 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 SURF1Q15526 300 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 NT5C1BQ96P26 610 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 KIF9Q9HAQ2 790 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 SUN2Q9UH99 717 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 SCG2P13521 617 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 IRX1P78414 480 aaPredicted RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 TTC19Q6DKK2 380 aaPredicted RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 CNOT6LQ96LI5 555 aaKnown RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 TESK2Q96S53 571 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 RNF26Q9BY78 433 aaPredicted RBP12.2□□□□□ -0.46
GCN1-201ENST00000300648 SLC13A4Q9UKG4 626 aa12.2□□□□□ -0.46
GCN1-201ENST00000300648 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 K7ENM7 598 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 ZBED6P86452 979 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 TFDP1Q14186 410 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 DDX25Q9UHL0 483 aaKnown RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 AATKQ6ZMQ8 1374 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 SMCO2A6NFE2 343 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 FAM26FQ5R3K3 315 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 WDR75Q8IWA0 830 aaKnown RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 C17orf53Q8N3J3 647 aaPredicted RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 DHX9Q08211 1270 aaKnown RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 FAM186BQ8IYM0 893 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 PHKBQ93100 1093 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 VPS39Q96JC1 886 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 UIMC1Q96RL1 719 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 SERPING1P05155 500 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 PIK3CAP42336 1068 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 RARS2Q5T160 578 aaKnown RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 ZC3H18Q86VM9 953 aaKnown RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 ABTB1Q969K4 478 aaPredicted RBP12.19□□□□□ -0.46
GCN1-201ENST00000300648 NUDCD1Q96RS6 583 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 UBE4BO95155 1302 aa12.19□□□□□ -0.46
GCN1-201ENST00000300648 KCNA6P17658 529 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms