RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 FEZ2Q9UHY8 353 aaPredicted RBP16.24■□□□□ 0.19
CDH23-202ENST00000299366 FBXO2Q9UK22 296 aaPredicted RBP16.24■□□□□ 0.19
CDH23-202ENST00000299366 WTIPA6NIX2 430 aaPredicted RBP16.23■□□□□ 0.19
CDH23-202ENST00000299366 SERPINB2P05120 415 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 KRT19P08727 400 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 VSNL1P62760 191 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 PDCLQ13371 301 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 USP37Q86T82 979 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
CDH23-202ENST00000299366 PLTPP55058 493 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 KAZNQ674X7 775 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 PPP1R21Q6ZMI0 780 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 AGPAT5Q9NUQ2 364 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 CTTNQ14247 550 aaKnown RBP16.23■□□□□ 0.19
CDH23-202ENST00000299366 TRIP13Q15645 432 aaPredicted RBP16.23■□□□□ 0.19
CDH23-202ENST00000299366 TBC1D22AQ8WUA7 517 aa16.23■□□□□ 0.19
CDH23-202ENST00000299366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.23■□□□□ 0.19
CDH23-202ENST00000299366 ZBED6P86452 979 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 CPDO75976 1380 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 GOLGA8IPA6NC78 632 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 GOLGA8JA6NMD2 632 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 RAD17O75943 681 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 APBA3O96018 575 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 KRT15P19012 456 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 STAT3P40763 770 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 DCUN1D2Q6PH85 259 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 NSRP1Q9H0G5 558 aaKnown RBP16.22■□□□□ 0.19
CDH23-202ENST00000299366 EMILIN3Q9NT22 766 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 ATP1A1P05023 1023 aaKnown RBP16.22■□□□□ 0.19
CDH23-202ENST00000299366 DLGAP5Q15398 846 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 MAN2A1Q16706 1144 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 XKR9Q5GH70 373 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 WDR44Q5JSH3 913 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 BSPRYQ5W0U4 402 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 CDCA7Q9BWT1 371 aaPredicted RBP16.22■□□□□ 0.19
CDH23-202ENST00000299366 NKIRAS1Q9NYS0 192 aa16.22■□□□□ 0.19
CDH23-202ENST00000299366 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
CDH23-202ENST00000299366 FRMD3A2A2Y4 597 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 LRRC53A6NM62 1247 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 ATF7P17544 494 aaPredicted RBP16.21■□□□□ 0.19
CDH23-202ENST00000299366 KLRK1P26718 216 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 SMTNP53814 917 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 PANX2Q96RD6 677 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 CSRNP1Q96S65 589 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 PCDHA13Q9Y5I0 950 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 KNDC1Q76NI1 1749 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 RGS16O15492 202 aaPredicted RBP16.21■□□□□ 0.19
CDH23-202ENST00000299366 TRAPPC10P48553 1259 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 KLK7P49862 253 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 UBL4BQ8N7F7 174 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 THOC1Q96FV9 657 aaKnown RBP16.21■□□□□ 0.19
CDH23-202ENST00000299366 DHTKD1Q96HY7 919 aaPredicted RBP16.21■□□□□ 0.19
CDH23-202ENST00000299366 L2HGDHQ9H9P8 463 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.21■□□□□ 0.19
CDH23-202ENST00000299366 POTEB3A0JP26 581 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 POTECB2RU33 542 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 SASH3O75995 380 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 POTEBQ6S5H4 581 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 B4GALNT4Q76KP1 1039 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 GOLPH3Q9H4A6 298 aa16.21■□□□□ 0.19
CDH23-202ENST00000299366 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.21■□□□□ 0.19
CDH23-202ENST00000299366 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.18
CDH23-202ENST00000299366 ERVV-1B6SEH8 477 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 H0YIN7 160 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 TBC1D8O95759 1140 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 TBK1Q9UHD2 729 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 XDHP47989 1333 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 LRCH2Q5VUJ6 765 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 PAXIP1Q6ZW49 1069 aaPredicted RBP16.2■□□□□ 0.18
CDH23-202ENST00000299366 SGMS1Q86VZ5 419 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 VSIG1Q86XK7 387 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
CDH23-202ENST00000299366 CLTAP09496 248 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 E2F5Q15329 346 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 ABCB5Q2M3G0 1257 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 DENND2CQ68D51 928 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 RUFY4Q6ZNE9 571 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 TC2NQ8N9U0 490 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 PPM1EQ8WY54 764 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 MAGOHBQ96A72 148 aaKnown RBP16.2■□□□□ 0.18
CDH23-202ENST00000299366 LCMT1Q9UIC8 334 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 COL4A3BPQ9Y5P4 624 aa16.2■□□□□ 0.18
CDH23-202ENST00000299366 ATP2A1O14983 1001 aa16.19■□□□□ 0.18
CDH23-202ENST00000299366 PLA2G4BP0C869 781 aa16.19■□□□□ 0.18
CDH23-202ENST00000299366 PFKFB3Q16875 520 aaPredicted RBP16.19■□□□□ 0.18
CDH23-202ENST00000299366 KCTD19Q17RG1 926 aaPredicted RBP16.19■□□□□ 0.18
CDH23-202ENST00000299366 TTBK2Q6IQ55 1244 aa16.19■□□□□ 0.18
CDH23-202ENST00000299366 NOA1Q8NC60 698 aaKnown RBP16.19■□□□□ 0.18
CDH23-202ENST00000299366 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
CDH23-202ENST00000299366 USP17L10C9JJH3 530 aa16.19■□□□□ 0.18
CDH23-202ENST00000299366 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.19■□□□□ 0.18
CDH23-202ENST00000299366 TBC1D31Q96DN5 1066 aa16.19■□□□□ 0.18
CDH23-202ENST00000299366 PPP1R12CQ9BZL4 782 aa16.19■□□□□ 0.18
CDH23-202ENST00000299366 MLXIPLQ9NP71 852 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms