RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 HERC4Q5GLZ8 1057 aaPredicted RBP15.12■□□□□ 0.01
CDH8-201ENST00000299345 FAM26FQ5R3K3 315 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 CCDC170Q8IYT3 715 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 PNMA5Q96PV4 448 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 SEMA6BQ9H3T3 888 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 PANK4Q9NVE7 773 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 KIAA1024Q9UPX6 916 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 KIAA1551Q9HCM1 1747 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
CDH8-201ENST00000299345 ERICH4A6NGS2 130 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 EIF3JO75822 258 aaKnown RBP15.12■□□□□ 0.01
CDH8-201ENST00000299345 MMP10P09238 476 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 ZNF76P36508 570 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 ARHGAP25P42331 645 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 LRRC63Q05C16 580 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 GJA10Q969M2 543 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 KANSL2Q9H9L4 492 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 LAMB1P07942 1786 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 MAST2Q6P0Q8 1798 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 KDM3AQ9Y4C1 1321 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 PSMD2Q13200 908 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 SMC1AQ14683 1233 aaKnown RBP15.12■□□□□ 0.01
CDH8-201ENST00000299345 NCAPH2Q6IBW4 605 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 PPP4R3AQ6IN85 833 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 RRAGAQ7L523 313 aa15.12■□□□□ 0.01
CDH8-201ENST00000299345 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
CDH8-201ENST00000299345 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 ZRANB2O95218 330 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDH8-201ENST00000299345 QRICH1Q2TAL8 776 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 HSP90B2PQ58FF3 399 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 CENPPQ6IPU0 288 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
CDH8-201ENST00000299345 PODNQ7Z5L7 613 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 NELFCDQ8IXH7 590 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 NUDT12Q9BQG2 462 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 PI4KBQ9UBF8 816 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 TFR2Q9UP52 801 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 SPDYE3A6NKU9 549 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 EEF2P13639 858 aaKnown RBP15.11■□□□□ 0.01
CDH8-201ENST00000299345 ICA1Q05084 483 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 CKAP4Q07065 602 aaKnown RBP15.11■□□□□ 0.01
CDH8-201ENST00000299345 MSL1Q68DK7 614 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 MASTLQ96GX5 879 aa15.11■□□□□ 0.01
CDH8-201ENST00000299345 TACC1O75410 805 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 TUBBP07437 444 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 SNHG28P0DPA3 235 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 ERMNQ8TAM6 284 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 SECISBP2LQ93073 1101 aaKnown RBP15.1■□□□□ 0.01
CDH8-201ENST00000299345 DRC1Q96MC2 740 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 ACBD3Q9H3P7 528 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 A0A0U1RQG5 324 aaPredicted RBP15.1■□□□□ 0.01
CDH8-201ENST00000299345 USH1GQ495M9 461 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 GPBP1Q86WP2 473 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 ZBTB9Q96C00 473 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 ERGIC2Q96RQ1 377 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 IFIH1Q9BYX4 1025 aaKnown RBP15.1■□□□□ 0.01
CDH8-201ENST00000299345 TSGA10Q9BZW7 698 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 COL24A1Q17RW2 1714 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 DLEC1Q9Y238 1755 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 TFRCP02786 760 aaKnown RBP15.1■□□□□ 0.01
CDH8-201ENST00000299345 OAS2P29728 719 aaKnown RBP15.1■□□□□ 0.01
CDH8-201ENST00000299345 PLA2G4AP47712 749 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 CDC37Q16543 378 aaPredicted RBP15.1■□□□□ 0.01
CDH8-201ENST00000299345 WDR59Q6PJI9 974 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 HDXQ7Z353 690 aa15.1■□□□□ 0.01
CDH8-201ENST00000299345 EIF3CLB5ME19 914 aaKnown RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 FKBP3Q00688 224 aaKnown RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 IQCEQ6IPM2 695 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 APOBEC3HQ6NTF7 200 aaKnown RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 TXLNBQ8N3L3 684 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 ANO3Q9BYT9 981 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 E9PMD0 336 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 NOVP48745 357 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 PRR16Q569H4 304 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 HAUS3Q68CZ6 603 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 HDAC6Q9UBN7 1215 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 REXO2Q9Y3B8 237 aaKnown RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 PLIN4Q96Q06 1357 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 IGKV6D-41A0A0C4DH26 115 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 ONECUT3O60422 494 aaPredicted RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 GDF11O95390 407 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 TBC1D8O95759 1140 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 COASYQ13057 564 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 SEPT2Q15019 361 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 KCNK18Q7Z418 384 aa15.09■□□□□ 0.01
CDH8-201ENST00000299345 LUC7LQ9NQ29 371 aaKnown RBP15.09■□□□□ 0.01
CDH8-201ENST00000299345 PLA2G4BP0C869 781 aa15.08■□□□□ 0.01
CDH8-201ENST00000299345 HERVK_113P62684 666 aa15.08■□□□□ 0.01
CDH8-201ENST00000299345 ENOX2Q16206 610 aaKnown RBP15.08■□□□□ 0.01
CDH8-201ENST00000299345 ZFPM1Q8IX07 1006 aa15.08■□□□□ 0.01
CDH8-201ENST00000299345 ALS2CR12Q96Q35 445 aa15.08■□□□□ 0.01
CDH8-201ENST00000299345 AMNQ9BXJ7 453 aa15.08■□□□□ 0.01
CDH8-201ENST00000299345 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0.01
CDH8-201ENST00000299345 KLRG2A4D1S0 409 aaPredicted RBP15.08■□□□□ 0
CDH8-201ENST00000299345 H0YIN7 160 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms