RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 NSUN4Q96CB9 384 aaKnown RBP13.89□□□□□ -0.19
TMEM200A-201ENST00000296978 KCNB1Q14721 858 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 MYOCDQ8IZQ8 938 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 ARHGAP20Q9P2F6 1191 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 CCDC121Q6ZUS5 278 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 TMEM47Q9BQJ4 181 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 AP1M1Q9BXS5 423 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 SH2D4AQ9H788 454 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 MYH10P35580 1976 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 PLEKHG2Q9H7P9 1386 aa13.88□□□□□ -0.19
TMEM200A-201ENST00000296978 EPHB6O15197 1021 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 SEC24CP53992 1094 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 DNAAF5Q86Y56 855 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 GIMAP7Q8NHV1 300 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 SH3RF3Q8TEJ3 882 aaPredicted RBP13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 ZIM3Q96PE6 472 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 SLIT3O75094 1523 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 PCP11498 1178 aaKnown RBP13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 ASIC2Q16515 512 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 GBP6Q6ZN66 633 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 CPLX4Q7Z7G2 160 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 DPH5Q9H2P9 285 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 ANAPC4Q9UJX5 808 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 MYH15Q9Y2K3 1946 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 CTNNA1P35221 906 aaKnown RBP13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 NPY5RQ15761 445 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 EMBQ6PCB8 327 aa13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 TSEN2Q8NCE0 465 aaKnown RBP13.87□□□□□ -0.19
TMEM200A-201ENST00000296978 NR1D1P20393 614 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 PPP1R2P41236 205 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 MMS22LQ6ZRQ5 1243 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 DDX12PQ92771 950 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 CCSER1Q9C0I3 900 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 GCOM1H8Y6P7 765 aaPredicted RBP13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 EIF3HO15372 352 aaKnown RBP eCLIP13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 LDHCP07864 332 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 MYZAPP0CAP1 466 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 C3orf67Q6ZVT6 689 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 MYCBPQ99417 103 aaPredicted RBP13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 ATRNO75882 1429 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 FAM26FQ5R3K3 315 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 CREG2Q8IUH2 290 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 UHMK1Q8TAS1 419 aaKnown RBP13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 CABS1Q96KC9 395 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 KBTBD4Q9NVX7 518 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
TMEM200A-201ENST00000296978 MYMKA6NI61 221 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 NKRFO15226 690 aaKnown RBP eCLIP13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 ORC4O43929 436 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 TDP2O95551 362 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 UBE2SQ16763 222 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 OR2W6PQ8NHA6 318 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 AK8Q96MA6 479 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 SELENOSQ9BQE4 189 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 JPH2Q9BR39 696 aaPredicted RBP13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 PANK4Q9NVE7 773 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 PLAGL2Q9UPG8 496 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 MYL1P05976 194 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 DGKHQ86XP1 1220 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 CUEDC2Q9H467 287 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 MYH2Q9UKX2 1941 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 ZNF263O14978 683 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 KLRC4O43908 158 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 AARSP49588 968 aaKnown RBP eCLIP13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 ADCY7P51828 1080 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 ALS2CLQ60I27 953 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 PLAAQ9Y263 795 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 ZNF804BA4D1E1 1349 aa13.85□□□□□ -0.19
TMEM200A-201ENST00000296978 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 C6orf229H3BNL8 230 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 MYO1FO00160 1098 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 HGSO14964 777 aaPredicted RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 GLI1P08151 1106 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 FAM83BQ5T0W9 1011 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 DDX42Q86XP3 938 aaKnown RBP eCLIP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 KIAA1024Q9UPX6 916 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 MST1RQ04912 1400 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 SCN11AQ9UI33 1791 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 LAD1O00515 517 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 CETN3O15182 167 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 PRPF6O94906 941 aaKnown RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 FAM153BP0C7A2 387 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 KRT13P13646 458 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 ABCB4P21439 1286 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 BRD2P25440 801 aaKnown RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 FKBP3Q00688 224 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms