RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 GEMIN8Q9NWZ8 242 aaKnown RBP11.28□□□□□ -0.6
CCDC36-201ENST00000296449 FAM153AQ9UHL3 310 aa11.28□□□□□ -0.6
CCDC36-201ENST00000296449 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
CCDC36-201ENST00000296449 USP17L3A6NCW0 530 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 USP17L4A6NCW7 530 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 ZSCAN5CA6NGD5 496 aaPredicted RBP11.27□□□□□ -0.6
CCDC36-201ENST00000296449 ZNF233A6NK53 670 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 ATP1A2P50993 1020 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 CFAP221Q4G0U5 840 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 FBXW10Q5XX13 1052 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 HGSNATQ68CP4 663 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 MCTP2Q6DN12 878 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 PDXDC1Q6P996 788 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.6
CCDC36-201ENST00000296449 USP17L1Q7RTZ2 530 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 IFT20Q8IY31 132 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 RNF10Q8N5U6 811 aaKnown RBP11.27□□□□□ -0.6
CCDC36-201ENST00000296449 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.6
CCDC36-201ENST00000296449 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 TSKSQ9UJT2 592 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 NFU1Q9UMS0 254 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 MTMR7Q9Y216 660 aa11.27□□□□□ -0.6
CCDC36-201ENST00000296449 TAF1P21675 1872 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 ESYT3A0FGR9 886 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 MYMKA6NI61 221 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 ARHGAP27Q6ZUM4 889 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 B4GALNT4Q76KP1 1039 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 KRT25Q7Z3Z0 450 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 DYNLL2Q96FJ2 89 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 PAGR1Q9BTK6 254 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 BLOC1S4Q9NUP1 217 aa11.27□□□□□ -0.61
CCDC36-201ENST00000296449 SSU72P8A0A1W2PR75 194 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 PALM3A6NDB9 673 aaPredicted RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 HEXIM1O94992 359 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 ERCC3P19447 782 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 HNRNPH1P31943 449 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 CFAP58Q5T655 872 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 LRRC55Q6ZSA7 311 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 SV2BQ7L1I2 683 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 TMC4Q7Z404 712 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 MREGQ8N565 214 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 C1orf131Q8NDD1 294 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 PIK3R5Q8WYR1 880 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 EPB41L5Q9HCM4 733 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 XIRP1Q702N8 1843 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 RBAK-RBAKDNI3L0D1 243 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 GOLGA8HP0CJ92 632 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 ATP6V1AP38606 617 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 USP8P40818 1118 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 NAPAP54920 295 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 GUCY2DQ02846 1103 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 GRB10Q13322 594 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 SF3B3Q15393 1217 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 CD302Q8IX05 232 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 GUF1Q8N442 669 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 CELF1Q92879 486 aaKnown RBP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 CALML4Q96GE6 196 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 CPVLQ9H3G5 476 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
CCDC36-201ENST00000296449 BCCIPQ9P287 314 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC36-201ENST00000296449 LSP1P33241 339 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 NAP1L1P55209 391 aaKnown RBP11.25□□□□□ -0.61
CCDC36-201ENST00000296449 KCNMA1Q12791 1236 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 PAK2Q13177 524 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 CACNA2D4Q7Z3S7 1137 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 CNPY4Q8N129 248 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 IFT81Q8WYA0 676 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 TFCP2L1Q9NZI6 479 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 PVALEFA0A1B0GWK0 134 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 KLRF2D3W0D1 207 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
CCDC36-201ENST00000296449 GUCY1A3Q02108 690 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 LRRC63Q05C16 580 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 TDRD12Q587J7 1177 aaKnown RBP11.25□□□□□ -0.61
CCDC36-201ENST00000296449 FOXR2Q6PJQ5 311 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 NCAPGQ9BPX3 1015 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
CCDC36-201ENST00000296449 SMCO2A6NFE2 343 aa11.24□□□□□ -0.61
CCDC36-201ENST00000296449 SRRM3A6NNA2 597 aaPredicted RBP11.24□□□□□ -0.61
CCDC36-201ENST00000296449 MEFVO15553 781 aaPredicted RBP11.24□□□□□ -0.61
CCDC36-201ENST00000296449 TLR2O60603 784 aa11.24□□□□□ -0.61
CCDC36-201ENST00000296449 ZPR1O75312 459 aa11.24□□□□□ -0.61
CCDC36-201ENST00000296449 PALMO75781 387 aa11.24□□□□□ -0.61
CCDC36-201ENST00000296449 TSPY3P0CV98 308 aa11.24□□□□□ -0.61
CCDC36-201ENST00000296449 TSPY8P0CW00 308 aa11.24□□□□□ -0.61
CCDC36-201ENST00000296449 HIBADHP31937 336 aaKnown RBP11.24□□□□□ -0.61
CCDC36-201ENST00000296449 FNTAP49354 379 aa11.24□□□□□ -0.61
CCDC36-201ENST00000296449 GUCY2FP51841 1108 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms