RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 RBL2Q08999 1139 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 GRB10Q13322 594 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
RFC4-201ENST00000296273 COPS5Q92905 334 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 SALL3Q9BXA9 1300 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 MYO9BQ13459 2157 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 SCN5AQ14524 2016 aa12.34□□□□□ -0.43
RFC4-201ENST00000296273 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
RFC4-201ENST00000296273 GH1P01241 217 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 MMP3P08254 477 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 SELPP16109 830 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 WDR5P61964 334 aaKnown RBP12.33□□□□□ -0.44
RFC4-201ENST00000296273 MCMDC2Q4G0Z9 681 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 TMEM31Q5JXX7 168 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 CCDC62Q6P9F0 684 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 CNKSR3Q6P9H4 555 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 LRRC8DQ7L1W4 858 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 KATNAL1Q9BW62 490 aa12.33□□□□□ -0.44
RFC4-201ENST00000296273 TCF20Q9UGU0 1960 aaKnown RBP12.33□□□□□ -0.44
RFC4-201ENST00000296273 ABHD14A-ACY1A0A1B0GW23 586 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 LPXNO60711 386 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 ARHGEF15O94989 841 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 ARIH2O95376 493 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 CXCL10P02778 98 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 STXBP2Q15833 593 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 DGKDQ16760 1214 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 KRT40Q6A162 431 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
RFC4-201ENST00000296273 MCF2L2Q86YR7 1114 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 NSUN6Q8TEA1 469 aaKnown RBP12.32□□□□□ -0.44
RFC4-201ENST00000296273 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 IWS1Q96ST2 819 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
RFC4-201ENST00000296273 GTF2IRD1Q9UHL9 959 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 ABCB11O95342 1321 aa12.32□□□□□ -0.44
RFC4-201ENST00000296273 REV3LO60673 3130 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 GPR37L1O60883 481 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 GJB5O95377 273 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
RFC4-201ENST00000296273 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 USH1GQ495M9 461 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 SEPT14Q6ZU15 432 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 DGKHQ86XP1 1220 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 PPP1R13LQ8WUF5 828 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 ESR2Q92731 530 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 EMID1Q96A84 441 aaPredicted RBP12.31□□□□□ -0.44
RFC4-201ENST00000296273 RAD9AQ99638 391 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 EPHX3Q9H6B9 360 aa12.31□□□□□ -0.44
RFC4-201ENST00000296273 REC8O95072 547 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 CKBP12277 381 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 PDE1AP54750 535 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 MFAP1P55081 439 aaKnown RBP12.3□□□□□ -0.44
RFC4-201ENST00000296273 ERVK-21P61565 698 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 ARHGAP1Q07960 439 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 IKBKEQ14164 716 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 GPNMBQ14956 572 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 LY6KQ17RY6 165 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 KAT2BQ92831 832 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 SNX21Q969T3 373 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 TGS1Q96RS0 853 aaKnown RBP12.3□□□□□ -0.44
RFC4-201ENST00000296273 CTAGE1Q96RT6 745 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 TRANK1O15050 2925 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 A0A0D9SFI3 127 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 LCHNA4D1U4 455 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
RFC4-201ENST00000296273 DEFB103AP81534 67 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 PTK7Q13308 1070 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 LAMC2Q13753 1193 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 CDC37Q16543 378 aaPredicted RBP12.3□□□□□ -0.44
RFC4-201ENST00000296273 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 SYTL5Q8TDW5 730 aaPredicted RBP12.3□□□□□ -0.44
RFC4-201ENST00000296273 FAM227BQ96M60 508 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 TAAR1Q96RJ0 339 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 RMDN3Q96TC7 470 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 HDAC6Q9UBN7 1215 aa12.3□□□□□ -0.44
RFC4-201ENST00000296273 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
RFC4-201ENST00000296273 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
RFC4-201ENST00000296273 PRRC2BQ5JSZ5 2229 aaKnown RBP12.29□□□□□ -0.44
RFC4-201ENST00000296273 EMSYQ7Z589 1322 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 PI4K2BG5E9Z4 385 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 NBNO60934 754 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 EIF3JO75822 258 aaKnown RBP12.29□□□□□ -0.44
RFC4-201ENST00000296273 F2P00734 622 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 PSEN2P49810 448 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 HAND2P61296 217 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 ASPRV1Q53RT3 343 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 ARHGEF16Q5VV41 709 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 PNMA1Q8ND90 353 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 PPTC7Q8NI37 304 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 GDPD5Q8WTR4 605 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms