RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ESRRAP11474 423 aaPredicted RBP12.73□□□□□ -0.37
SNIP1-201ENST00000296215 WTAPQ15007 396 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 ERICH1Q86X53 443 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 KSR1Q8IVT5 923 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 GGA2Q9UJY4 613 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 CARMIL2Q6F5E8 1435 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 TMEM247A6NEH6 219 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 RASSF9O75901 435 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 TPPPO94811 219 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 HMOX1P09601 288 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 RGS2P41220 211 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 RHBDL3P58872 404 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 GPC6Q9Y625 555 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 INSRP06213 1382 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 NOTOA8MTQ0 251 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 POLR2EP19388 210 aaKnown RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 MYBPC3Q14896 1274 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 C15orf59Q2T9L4 293 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 PITPNM3Q9BZ71 974 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 SEC63Q9UGP8 760 aaKnown RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 ARL2BPQ9Y2Y0 163 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 RBMX2Q9Y388 322 aaKnown RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 HBS1LQ9Y450 684 aaKnown RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 EIF2S1P05198 315 aaKnown RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 ETS2P15036 469 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 LBRQ14739 615 aaKnown RBP12.72□□□□□ -0.37
SNIP1-201ENST00000296215 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 WASF1Q92558 559 aa12.72□□□□□ -0.37
SNIP1-201ENST00000296215 SYNRGQ9UMZ2 1314 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 ATP1A4Q13733 1029 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 TAF12Q16514 161 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 ICA1LQ8NDH6 482 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 DQX1Q8TE96 717 aaKnown RBP12.71□□□□□ -0.37
SNIP1-201ENST00000296215 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 ANKRD36BP1Q96IX9 119 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 CAAP1Q9H8G2 361 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 SELENONQ9NZV5 590 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 ATPIF1Q9UII2 106 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 CXCR5P32302 372 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 MAGEA10P43363 369 aaPredicted RBP12.71□□□□□ -0.37
SNIP1-201ENST00000296215 TRIM63Q969Q1 353 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 XPO6Q96QU8 1125 aaKnown RBP12.71□□□□□ -0.37
SNIP1-201ENST00000296215 TAB2Q9NYJ8 693 aa12.71□□□□□ -0.37
SNIP1-201ENST00000296215 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.38
SNIP1-201ENST00000296215 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.38
SNIP1-201ENST00000296215 ATP6V1C1P21283 382 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 PRKAR2BP31323 418 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 STK4Q13043 487 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 CEP55Q53EZ4 464 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 ARHGEF18Q6ZSZ5 1173 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 AACSQ86V21 672 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.38
SNIP1-201ENST00000296215 LRRC2Q9BYS8 371 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 DCLRE1BQ9H816 532 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 B3GALNT1O75752 331 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 PEX5P50542 639 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 RASGRF1Q13972 1273 aa12.71□□□□□ -0.38
SNIP1-201ENST00000296215 MMTAG2Q9BU76 263 aaKnown RBP12.71□□□□□ -0.38
SNIP1-201ENST00000296215 ITIH6Q6UXX5 1313 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 GFPT2O94808 682 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 MXI1P50539 228 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 BNIP1Q12981 228 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 PNOCQ13519 176 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 OTUD6AQ7L8S5 288 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 GDAP1Q8TB36 358 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 NLRP7Q8WX94 980 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 MMS19Q96T76 1030 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 KCNH3Q9ULD8 1083 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 TELO2Q9Y4R8 837 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 FAM170AA1A519 330 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 TTLL13PA6NNM8 815 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 E9PMD0 336 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 SYF2O95926 243 aaKnown RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 ATP6V1B1P15313 513 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 KRT15P19012 456 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 ALDH5A1P51649 535 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 CHCHD4Q8N4Q1 142 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 SLC17A8Q8NDX2 589 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 ST13P5Q8NFI4 369 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 CAPSLQ8WWF8 208 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 PRCCQ92733 491 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 ERBINQ96RT1 1412 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 CORO1BQ9BR76 489 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 BLMP54132 1417 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 PRLP01236 227 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 KRT3P12035 628 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 SP100P23497 879 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 KRT81Q14533 505 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 ME3Q16798 604 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms