RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ARHGAP4P98171 946 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 USH1GQ495M9 461 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 ZNF280CQ8ND82 737 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 KIFC2Q96AC6 838 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 CTAGE1Q96RT6 745 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 WRNIP1Q96S55 665 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 PLIN2Q99541 437 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 MAF1Q9H063 256 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 SAMSN1Q9NSI8 373 aaKnown RBP10.27□□□□□ -0.77
PDPN-201ENST00000294489 FBXO28Q9NVF7 368 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 MAP3K20Q9NYL2 800 aaKnown RBP10.27□□□□□ -0.77
PDPN-201ENST00000294489 PPP1R9AQ9ULJ8 1098 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 RPTORQ8N122 1335 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 CCZ1BP86790 482 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 CCZ1P86791 482 aaPredicted RBP10.27□□□□□ -0.77
PDPN-201ENST00000294489 PAK1Q13153 545 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 KCNB1Q14721 858 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 TMEM119Q4V9L6 283 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 USP50Q70EL3 339 aaPredicted RBP10.27□□□□□ -0.77
PDPN-201ENST00000294489 LDHDQ86WU2 507 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 ZC3H15Q8WU90 426 aaKnown RBP10.27□□□□□ -0.77
PDPN-201ENST00000294489 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 MED15Q96RN5 788 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 RWDD2AQ9UIY3 292 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 AFG3L2Q9Y4W6 797 aa10.27□□□□□ -0.77
PDPN-201ENST00000294489 TPM2P07951 284 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 STIM1Q13586 685 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 MTMR2Q13614 643 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 ZYXQ15942 572 aaKnown RBP10.26□□□□□ -0.77
PDPN-201ENST00000294489 ILDR2Q71H61 639 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 REPS2Q8NFH8 660 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 ZKSCAN4Q969J2 545 aaPredicted RBP10.26□□□□□ -0.77
PDPN-201ENST00000294489 CDK5RAP3Q96JB5 506 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 FEZ1Q99689 392 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 GTPBP4Q9BZE4 634 aaKnown RBP10.26□□□□□ -0.77
PDPN-201ENST00000294489 CTNND2Q9UQB3 1225 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 LCTP09848 1927 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 SPIRE1Q08AE8 756 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 GRB10Q13322 594 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 FILIP1LQ4L180 1135 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 KRT79Q5XKE5 535 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 ARMCX5Q6P1M9 558 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
PDPN-201ENST00000294489 CCDC112Q8NEF3 446 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 PRIMPOLQ96LW4 560 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 PNMA5Q96PV4 448 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 PICK1Q9NRD5 415 aa10.26□□□□□ -0.77
PDPN-201ENST00000294489 IGLV3-22A0A075B6J6 115 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
PDPN-201ENST00000294489 SLFN12Q8IYM2 578 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 ANKRD20A12PQ8NF67 263 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 C7orf25Q9BPX7 421 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 STK17AQ9UEE5 414 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 SNCAIPQ9Y6H5 919 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 MYPNQ86TC9 1320 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 SPDYE3A6NKU9 549 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 GCOM1H8Y6P7 765 aaPredicted RBP10.25□□□□□ -0.77
PDPN-201ENST00000294489 ATP2A1O14983 1001 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 KLRC4O43908 158 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 POLR2MP0CAP2 368 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 OAZ1P54368 228 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 SPAG1Q07617 926 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 KMT5BQ4FZB7 885 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 PRAMEF18Q5VWM3 479 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 CCDC174Q6PII3 467 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.25□□□□□ -0.77
PDPN-201ENST00000294489 NELFBQ8WX92 580 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 FAM20AQ96MK3 541 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 RPAP3Q9H6T3 665 aaPredicted RBP10.25□□□□□ -0.77
PDPN-201ENST00000294489 LOXHD1Q8IVV2 1947 aa10.25□□□□□ -0.77
PDPN-201ENST00000294489 RHOBTB3O94955 611 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 SPP2Q13103 211 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 CDKAL1Q5VV42 579 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 SV2BQ7L1I2 683 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 RABGAP1Q9Y3P9 1069 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 A0A1B0GTH6 734 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 FAM86B1E9PN63 330 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 FAM86B2P0C5J1 330 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 PRCPP42785 496 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 DGKZQ13574 1117 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 NR1I3Q14994 352 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 COBLL1Q53SF7 1204 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 TBC1D5Q92609 795 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 DCPSQ96C86 337 aaKnown RBP10.24□□□□□ -0.77
PDPN-201ENST00000294489 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 TRIM9Q9C026 710 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 LRRC27Q9C0I9 530 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 BLOC1S4Q9NUP1 217 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 EXOC1Q9NV70 894 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 INTS13Q9NVM9 706 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 PCDHA12Q9UN75 941 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 GDAQ9Y2T3 454 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 VWA5AO00534 786 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 PSMA7O14818 248 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 HOXA13P31271 388 aaPredicted RBP10.24□□□□□ -0.77
PDPN-201ENST00000294489 PPP1R2P41236 205 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 KCNJ6P48051 423 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 ASIC1P78348 528 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms